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feat: gene essentiality workflow #675

Merged
merged 24 commits into from
Oct 28, 2024
Merged

feat: gene essentiality workflow #675

merged 24 commits into from
Oct 28, 2024

Commits on Jul 7, 2023

  1. feat: gene essentiality workflow with pr comment

    @mihai-sysbio
    mihai-sysbio committed Jul 7, 2023
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Commits on Oct 6, 2023

  1. Merge branch 'develop' into feat/gene-essentiality-workflow

    @mihai-sysbio
    mihai-sysbio committed Oct 6, 2023
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  2. chore: expand workflow targets

    @mihai-sysbio
    mihai-sysbio authored Oct 6, 2023
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  3. fix: add to matlab path

    @mihai-sysbio
    mihai-sysbio committed Oct 6, 2023
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Commits on Oct 18, 2024

  1. fix: style of macaw summary output

    @edkerk
    edkerk committed Oct 18, 2024
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  2. Merge branch 'feat/macaw_output' into feat/gene-essentiality-workflow

    @edkerk
    edkerk committed Oct 18, 2024
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Commits on Oct 19, 2024

  1. feat: post and store gene essentiality results

    @edkerk
    edkerk committed Oct 19, 2024
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  2. fix: model path and allow 2 workflow comments

    @edkerk
    edkerk committed Oct 19, 2024
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  3. chore: add macaw test result

    @edkerk @github-actions
    edkerk authored and github-actions[bot] committed Oct 19, 2024
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  4. fix: use recent RAVEN and gurobi

    @edkerk
    edkerk committed Oct 19, 2024
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  5. fix: avoid Penr statistic calculation

    @edkerk
    edkerk committed Oct 19, 2024
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  6. fix: missing ) in gene-essentiality.yml

    @edkerk
    edkerk committed Oct 19, 2024
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  7. chore: add gene essentiality test result

    @edkerk @github-actions
    edkerk authored and github-actions[bot] committed Oct 19, 2024
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Commits on Oct 20, 2024

  1. fix: gene-essentiality.yml output format

    @edkerk
    edkerk committed Oct 20, 2024
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  2. fix: location of data/testResults/README.md

    @edkerk
    edkerk committed Oct 20, 2024
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  3. chore: add macaw test result

    @edkerk @github-actions
    edkerk authored and github-actions[bot] committed Oct 20, 2024
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Commits on Oct 21, 2024

  1. fix: test workflow including branch update

    @edkerk
    edkerk committed Oct 21, 2024
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  2. fix: correct git-auto-commit-action@v5

    @edkerk
    edkerk committed Oct 21, 2024
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  3. chore: add gene essentiality test result

    @edkerk @github-actions
    edkerk authored and github-actions[bot] committed Oct 21, 2024
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  4. fix: run all Hart et al. 2015 tests

    @edkerk
    edkerk committed Oct 21, 2024
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  5. fix: missing )

    @edkerk
    edkerk committed Oct 21, 2024
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  6. chore: add gene essentiality test result

    @edkerk @github-actions
    edkerk authored and github-actions[bot] committed Oct 21, 2024
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  7. fix: only git stash pop if stash exist

    @edkerk
    edkerk committed Oct 21, 2024
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Commits on Oct 23, 2024

  1. fix gene-essentiality ' not "

    @edkerk
    edkerk committed Oct 23, 2024
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