Update local and build in local

SynBioDex · Sep 13, 2024 · 21e58ed · 21e58ed
1 parent 14e29ba
commit 21e58ed
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Showing 4 changed files with 14 additions and 10 deletions.
diff --git a/flask/config.json b/flask/config.json
@@ -2,7 +2,7 @@
    "uclust_identity": "0.8",
    "elasticsearch_index_name": "part",
    "pagerank_tolerance": "0.0001",
-   "elasticsearch_endpoint": "http://localhost:9200/",
+   "elasticsearch_endpoint": "http://elasticsearch:9200/",
    "sparql_endpoint": "http://localhost:8890/sparql?",
    "last_update_start": "none",
    "last_update_end": "none",

diff --git a/flask/docker/Dockerfile b/flask/docker/Dockerfile
@@ -38,4 +38,4 @@ RUN mkdir /mnt/config && \
     rm -rf dumps && \
     ln -s /mnt/data dumps
 
-CMD sh -c ". ../../jammy/bin/activate && ./start.sh"
+CMD sh -c ". ../../jammy/bin/activate && ./start.sh && cat config.json"
diff --git a/flask/docker/Dockerfile-synbiohub b/flask/docker/Dockerfile-synbiohub
@@ -40,4 +40,4 @@ RUN mkdir /mnt/config && \
 
 ADD config-synbiohub.json /mnt/config/config.json
 
-CMD sh -c ". ../../jammy/bin/activate && ./start.sh"
+CMD sh -c ". ../../jammy/bin/activate && ./start.sh && cat config.json"
diff --git a/flask/docker/config-synbiohub.json b/flask/docker/config-synbiohub.json
@@ -1,10 +1,14 @@
 {
-  "distributed_search": true, 
-  "elasticsearch_endpoint": "http://elasticsearch:9200/", 
-  "elasticsearch_index_name": "part", 
-  "pagerank_tolerance": "0.0001", 
-  "sparql_endpoint": "http://virtuoso:8890/sparql?", 
-  "synbiohub_public_graph": "https://synbiohub.utah.edu/public", 
-  "uclust_identity": "0.8"
+   "uclust_identity": "0.8",
+   "elasticsearch_index_name": "part",
+   "pagerank_tolerance": "0.0001",
+   "elasticsearch_endpoint": "http://elasticsearch:9200/",
+   "sparql_endpoint": "http://localhost:8890/sparql?",
+   "last_update_start": "none",
+   "last_update_end": "none",
+   "distributed_search": false,
+   "which_search": "vsearch",
+   "autoUpdateIndex": false,
+   "updateTimeInDays": "1"
 }