Merge pull request #33 from Sydney-Informatics-Hub/gitpod

Change gitpod to hello-nextflow workspace

.gitpod.yml

@@ -1,6 +1,6 @@
 # Custom workspace and checkout locations
-workspaceLocation: gitpod/gitpod.code-workspace  # Refers to your .code-workspace file
-checkoutLocation: gitpod 
+workspaceLocation: /workspace/hello-nextflow/gitpod.code-workspace  # Refers to your .code-workspace file
+checkoutLocation: /workspace/hello-nextflow # Ensure Git clones into the correct location
 
 # GitHub prebuild configuration
 github:
@@ -27,17 +27,11 @@ image:
 tasks:
   - before: printf 'unset JAVA_TOOL_OPTIONS\n' >> $HOME/.bashrc && exit
 
-  # FOR TESTING: check out workspace in the `gitpod` branch
-  - name: Checkout gitpod branch
-    init: |
-      git fetch origin gitpod  # Fetch the latest changes for the gitpod branch
-      git checkout gitpod || git checkout -b gitpod origin/gitpod  # Switch to the gitpod branch
-
   # Create directory structure 
   - name: Create Directories
     init: |
-      mkdir -p ~/hello-nextflow/part1
-      mkdir -p ~/hello-nextflow/part2
+      mkdir -p /workspace/hello-nextflow/part1
+      mkdir -p /workspace/hello-nextflow/part2
 
 # Download containers to be used in part 2 
   - name: Download containers
@@ -48,7 +42,7 @@ tasks:
     command: docker run hello-world
 
 # Open docs in a web browser
-  - name: Start web server
+  - name: Open Documentation Page
     command: gp ports await 23000 && gp preview https://sydney-informatics-hub.github.io/hello-nextflow/
 
 # Start the tutorial