chore: support Python 3.12 (#99)

Signed-off-by: SdgJlbl <[email protected]>

.github/workflows/publish.yml

@@ -11,7 +11,7 @@ jobs:
       - uses: actions/checkout@v3
       - uses: actions/setup-python@v5
         with:
-          python-version: 3.11
+          python-version: 3.12
       - name: Install Hatch
         run: pipx install hatch
       - name: Build dist

.github/workflows/python.yml

@@ -19,7 +19,7 @@ jobs:
       - name: Set up python
         uses: actions/setup-python@v2
         with:
-          python-version: 3.11
+          python-version: 3.12
       - name: Install tools
         run: pip install flake8
       - name: Lint

pyproject.toml

@@ -24,6 +24,7 @@ classifiers = [
     "Programming Language :: Python :: 3.9",
     "Programming Language :: Python :: 3.10",
     "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12",
 ]
 license = { file = "LICENSE" }
 authors = [{ name = "Owkin, Inc." }]

substratools/function.py

@@ -13,8 +13,8 @@
 from substratools import exceptions
 from substratools import opener
 from substratools import utils
-from substratools.exceptions import FunctionNotFoundError
 from substratools.exceptions import ExistingRegisteredFunctionError
+from substratools.exceptions import FunctionNotFoundError
 from substratools.task_resources import StaticInputIdentifiers
 from substratools.task_resources import TaskResources
 from substratools.workspace import FunctionWorkspace

substratools/task_resources.py

@@ -1,11 +1,11 @@
 import json
+from enum import Enum
 from typing import Dict
 from typing import List
 from typing import Optional
 from typing import Union
 
 from substratools import exceptions
-from enum import Enum
 
 
 class StaticInputIdentifiers(str, Enum):

substratools/utils.py

@@ -1,5 +1,5 @@
-import imp
 import importlib
+import importlib.util
 import inspect
 import logging
 import os
@@ -66,7 +66,8 @@ def wrapper(*args, **kwargs):
 def import_module(module_name, code):
     if module_name in sys.modules:
         logging.warning("Module {} will be overwritten".format(module_name))
-    module = imp.new_module(module_name)
+    spec = importlib.util.spec_from_loader(module_name, loader=None, origin=module_name)
+    module = importlib.util.module_from_spec(spec)
     sys.modules[module_name] = module
     exec(code, module.__dict__)
 

tests/conftest.py

@@ -1,6 +1,5 @@
 import json
 import os
-
 import sys
 from pathlib import Path
 from uuid import uuid4
@@ -9,8 +8,8 @@
 
 from substratools.task_resources import TaskResources
 from substratools.utils import import_module
-from tests.utils import OutputIdentifiers
 from substratools.workspace import FunctionWorkspace
+from tests.utils import OutputIdentifiers
 
 
 @pytest.fixture

tests/test_aggregatealgo.py

@@ -7,14 +7,14 @@
 
 import pytest
 
-from substratools import function
 from substratools import exceptions
+from substratools import function
 from substratools import opener
 from substratools.task_resources import TaskResources
 from substratools.workspace import FunctionWorkspace
+from tests import utils
 from tests.utils import InputIdentifiers
 from tests.utils import OutputIdentifiers
-from tests import utils
 
 
 @pytest.fixture(autouse=True)

tests/test_compositealgo.py

@@ -1,16 +1,16 @@
 import json
 import os
-
 from typing import Any
 from typing import Optional
 from typing import TypedDict
+
 import pytest
 
-from substratools import function
 from substratools import exceptions
+from substratools import function
+from substratools import opener
 from substratools.task_resources import TaskResources
 from substratools.workspace import FunctionWorkspace
-from substratools import opener
 from tests import utils
 from tests.utils import InputIdentifiers
 from tests.utils import OutputIdentifiers

tests/test_function.py

@@ -2,15 +2,16 @@
 import shutil
 from os import PathLike
 from pathlib import Path
-from typing import Any, Tuple
+from typing import Any
 from typing import List
 from typing import Optional
+from typing import Tuple
 from typing import TypedDict
 
 import pytest
 
-from substratools import function
 from substratools import exceptions
+from substratools import function
 from substratools import opener
 from substratools.task_resources import StaticInputIdentifiers
 from substratools.task_resources import TaskResources

tests/test_opener.py

@@ -3,12 +3,12 @@
 import pytest
 
 from substratools import exceptions
-from substratools.opener import load_from_module
 from substratools.opener import Opener
+from substratools.opener import OpenerWrapper
+from substratools.opener import load_from_module
 from substratools.utils import import_module
 from substratools.utils import load_interface_from_module
 from substratools.workspace import DEFAULT_INPUT_DATA_FOLDER_PATH
-from substratools.opener import OpenerWrapper
 
 
 @pytest.fixture

tests/test_task_resources.py

@@ -1,9 +1,11 @@
-from substratools.task_resources import TaskResources
-from substratools.task_resources import StaticInputIdentifiers
+import json
+
 import pytest
+
 from substratools.exceptions import InvalidCLIError
 from substratools.exceptions import InvalidInputOutputsError
-import json
+from substratools.task_resources import StaticInputIdentifiers
+from substratools.task_resources import TaskResources
 
 _VALID_RESOURCES = [
     {"id": "foo", "value": "bar", "multiple": True},