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* updates: added new JavaStics version/java version, info about how to handle the stics exe generation under MacOS (ref to the JavaStics doc), fixed internal page links. Fix: mask messages about common names of the SticsRFiles and xml2 xml_document class name. * Update CITATION.cff * updates for a new release + little fix about a note about a global variable "." * Update CITATION.cff * fix: SticsRFiles in imports * Update CITATION.cff * SticsRFiles in suggests * Update CITATION.cff * trying to force main install in checks as in CroptimizR * let SticsRFiles in Imports and Remotes * Update CITATION.cff * restoring previous install config for SticsRFiles@main * SticsRFiles again in Imports * Update CITATION.cff * new release 1.2.0 * Update CITATION.cff --------- Co-authored-by: plecharpent <[email protected]>
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@@ -8,7 +8,7 @@ message: 'To cite package "SticsOnR" in publications use:' | |
type: software | ||
license: LGPL-3.0-or-later | ||
title: 'SticsOnR: Manage STICS Simulations Running the Executable or JavaStics,' | ||
version: 1.1.0 | ||
version: 1.2.0 | ||
abstract: 'Running simulations with the ''STICS'' crop model. Different ways of performing | ||
simulations are available and based on three use-cases: 1/ Calling ''JavaStics'' | ||
command line to run simulations on given situations. ''JavaStics'' handles text | ||
|
@@ -37,7 +37,7 @@ authors: | |
orcid: https://orcid.org/0000-0002-9310-2377 | ||
repository-code: https://github.com/SticsRPacks/SticsOnR | ||
url: https://doi.org/10.5281/zenodo.4443130 | ||
date-released: '2023-07-12' | ||
date-released: '2024-02-22' | ||
contact: | ||
- family-names: Lecharpentier | ||
given-names: Patrice | ||
|
@@ -52,7 +52,7 @@ references: | |
- name: R Core Team | ||
location: | ||
name: Vienna, Austria | ||
year: '2023' | ||
year: '2024' | ||
institution: | ||
name: R Foundation for Statistical Computing | ||
version: '>= 3.6.0' | ||
|
@@ -66,7 +66,7 @@ references: | |
- family-names: Csárdi | ||
given-names: Gábor | ||
email: [email protected] | ||
year: '2023' | ||
year: '2024' | ||
- type: software | ||
title: crayon | ||
abstract: 'crayon: Colored Terminal Output' | ||
|
@@ -77,7 +77,7 @@ references: | |
- family-names: Csárdi | ||
given-names: Gábor | ||
email: [email protected] | ||
year: '2023' | ||
year: '2024' | ||
version: '>= 1.3.4' | ||
- type: software | ||
title: doParallel | ||
|
@@ -90,7 +90,7 @@ references: | |
given-names: Microsoft | ||
- family-names: Weston | ||
given-names: Steve | ||
year: '2023' | ||
year: '2024' | ||
- type: software | ||
title: dplyr | ||
abstract: 'dplyr: A Grammar of Data Manipulation' | ||
|
@@ -114,7 +114,7 @@ references: | |
given-names: Davis | ||
email: [email protected] | ||
orcid: https://orcid.org/0000-0003-4777-038X | ||
year: '2023' | ||
year: '2024' | ||
- type: software | ||
title: foreach | ||
abstract: 'foreach: Provides Foreach Looping Construct' | ||
|
@@ -125,7 +125,7 @@ references: | |
- name: Microsoft | ||
- family-names: Weston | ||
given-names: Steve | ||
year: '2023' | ||
year: '2024' | ||
- type: software | ||
title: lifecycle | ||
abstract: 'lifecycle: Manage the Life Cycle of your Package Functions' | ||
|
@@ -135,12 +135,12 @@ references: | |
authors: | ||
- family-names: Henry | ||
given-names: Lionel | ||
email: lionel@rstudio.com | ||
email: lionel@posit.co | ||
- family-names: Wickham | ||
given-names: Hadley | ||
email: hadley@rstudio.com | ||
email: hadley@posit.co | ||
orcid: https://orcid.org/0000-0003-4757-117X | ||
year: '2023' | ||
year: '2024' | ||
- type: software | ||
title: magrittr | ||
abstract: 'magrittr: A Forward-Pipe Operator for R' | ||
|
@@ -154,7 +154,7 @@ references: | |
- family-names: Wickham | ||
given-names: Hadley | ||
email: [email protected] | ||
year: '2023' | ||
year: '2024' | ||
- type: software | ||
title: parallel | ||
abstract: 'R: A Language and Environment for Statistical Computing' | ||
|
@@ -163,7 +163,7 @@ references: | |
- name: R Core Team | ||
location: | ||
name: Vienna, Austria | ||
year: '2023' | ||
year: '2024' | ||
institution: | ||
name: R Foundation for Statistical Computing | ||
- type: software | ||
|
@@ -185,7 +185,7 @@ references: | |
- family-names: Ritchie | ||
given-names: Gary | ||
email: [email protected] | ||
year: '2023' | ||
year: '2024' | ||
- type: software | ||
title: stats | ||
abstract: 'R: A Language and Environment for Statistical Computing' | ||
|
@@ -194,9 +194,40 @@ references: | |
- name: R Core Team | ||
location: | ||
name: Vienna, Austria | ||
year: '2023' | ||
year: '2024' | ||
institution: | ||
name: R Foundation for Statistical Computing | ||
- type: software | ||
title: tibble | ||
abstract: 'tibble: Simple Data Frames' | ||
notes: Imports | ||
url: https://tibble.tidyverse.org/ | ||
repository: https://CRAN.R-project.org/package=tibble | ||
authors: | ||
- family-names: Müller | ||
given-names: Kirill | ||
email: [email protected] | ||
orcid: https://orcid.org/0000-0002-1416-3412 | ||
- family-names: Wickham | ||
given-names: Hadley | ||
email: [email protected] | ||
year: '2024' | ||
- type: software | ||
title: tidyr | ||
abstract: 'tidyr: Tidy Messy Data' | ||
notes: Imports | ||
url: https://tidyr.tidyverse.org | ||
repository: https://CRAN.R-project.org/package=tidyr | ||
authors: | ||
- family-names: Wickham | ||
given-names: Hadley | ||
email: [email protected] | ||
- family-names: Vaughan | ||
given-names: Davis | ||
email: [email protected] | ||
- family-names: Girlich | ||
given-names: Maximilian | ||
year: '2024' | ||
- type: software | ||
title: SticsRFiles | ||
abstract: 'SticsRFiles: Read and Modify ''STICS'' Input/Output Files' | ||
|
@@ -220,23 +251,8 @@ references: | |
given-names: Michel | ||
email: [email protected] | ||
orcid: https://orcid.org/0000-0002-9310-2377 | ||
year: '2023' | ||
year: '2024' | ||
version: '>= 1.1.3' | ||
- type: software | ||
title: tibble | ||
abstract: 'tibble: Simple Data Frames' | ||
notes: Imports | ||
url: https://tibble.tidyverse.org/ | ||
repository: https://CRAN.R-project.org/package=tibble | ||
authors: | ||
- family-names: Müller | ||
given-names: Kirill | ||
email: [email protected] | ||
orcid: https://orcid.org/0000-0002-1416-3412 | ||
- family-names: Wickham | ||
given-names: Hadley | ||
email: [email protected] | ||
year: '2023' | ||
- type: software | ||
title: covr | ||
abstract: 'covr: Test Coverage for Packages' | ||
|
@@ -247,7 +263,7 @@ references: | |
- family-names: Hester | ||
given-names: Jim | ||
email: [email protected] | ||
year: '2023' | ||
year: '2024' | ||
- type: software | ||
title: knitr | ||
abstract: 'knitr: A General-Purpose Package for Dynamic Report Generation in R' | ||
|
@@ -259,7 +275,7 @@ references: | |
given-names: Yihui | ||
email: [email protected] | ||
orcid: https://orcid.org/0000-0003-0645-5666 | ||
year: '2023' | ||
year: '2024' | ||
- type: software | ||
title: rmarkdown | ||
abstract: 'rmarkdown: Dynamic Documents for R' | ||
|
@@ -302,7 +318,7 @@ references: | |
given-names: Richard | ||
email: [email protected] | ||
orcid: https://orcid.org/0000-0003-3925-190X | ||
year: '2023' | ||
year: '2024' | ||
- type: software | ||
title: spelling | ||
abstract: 'spelling: Tools for Spell Checking in R' | ||
|
@@ -317,7 +333,7 @@ references: | |
- family-names: Hester | ||
given-names: Jim | ||
email: [email protected] | ||
year: '2023' | ||
year: '2024' | ||
- type: software | ||
title: testthat | ||
abstract: 'testthat: Unit Testing for R' | ||
|
@@ -328,4 +344,4 @@ references: | |
- family-names: Wickham | ||
given-names: Hadley | ||
email: [email protected] | ||
year: '2023' | ||
year: '2024' |
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@@ -1,8 +1,8 @@ | ||
Type: Package | ||
Package: SticsOnR | ||
Title: Manage STICS Simulations Running the Executable or JavaStics, | ||
Version: 1.1.0 | ||
Date: 2023-07-12 | ||
Version: 1.2.0 | ||
Date: 2024-02-22 | ||
Authors@R: c( | ||
person("Patrice", "Lecharpentier", , "[email protected]", role = c("aut", "cre"), | ||
comment = c(ORCID = "0000-0002-4044-4322")), | ||
|
@@ -46,9 +46,9 @@ Imports: | |
parallel, | ||
rstudioapi, | ||
stats, | ||
SticsRFiles (>= 1.1.3), | ||
tibble, | ||
tidyr | ||
tidyr, | ||
SticsRFiles (>= 1.1.3) | ||
Suggests: | ||
covr, | ||
knitr, | ||
|
@@ -61,4 +61,4 @@ ByteCompile: true | |
Encoding: UTF-8 | ||
Language: en-US | ||
Roxygen: list(markdown = TRUE) | ||
RoxygenNote: 7.2.1 | ||
RoxygenNote: 7.3.1 |
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@@ -0,0 +1 @@ | ||
utils::globalVariables(".") |
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