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SpikeInterface · May 22, 2024 · 210d913 · 210d913
1 parent ef0bba9
commit 210d913
Showing 1 changed file with 6 additions and 1 deletion.
diff --git a/src/spikeinterface/sortingcomponents/clustering/tdc.py b/src/spikeinterface/sortingcomponents/clustering/tdc.py
@@ -157,14 +157,19 @@ def main_function(cls, recording, peaks, params):
             features_folder,
             method="local_feature_clustering",
             method_kwargs=dict(
+
                 clusterer="hdbscan",
+                clusterer_kwargs={"min_cluster_size": min_cluster_size, "allow_single_cluster": True, "cluster_selection_method": "eom"},
+
                 # clusterer="isocut5",
+                # clusterer_kwargs={"min_cluster_size": min_cluster_size},
+
                 feature_name="sparse_tsvd",
                 # feature_name="sparse_wfs",
                 neighbours_mask=neighbours_mask,
                 waveforms_sparse_mask=sparse_mask,
                 min_size_split=min_cluster_size,
-                clusterer_kwargs={"min_cluster_size": min_cluster_size},
+
                 n_pca_features=3,
                 scale_n_pca_by_depth=True,
             ),