Unify 'defaults' and use of quotations across docstrings #1717
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Test streaming extractors | |
| on: | |
| pull_request: | |
| types: [synchronize, opened, reopened] | |
| branches: | |
| - main | |
| concurrency: # Cancel previous workflows on the same pull request | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test-streaming-extractors: | |
| name: Testing using ${{ matrix.os }} with ${{ matrix.python-version }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-latest"] | |
| python-version: ["3.10"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: s-weigand/setup-conda@v1 | |
| with: | |
| update-conda: true | |
| python-version: ${{ matrix.python-version }} | |
| conda-channels: conda-forge | |
| - run: git fetch --prune --unshallow --tags | |
| - name: Install openblas | |
| run: sudo apt install libopenblas-dev # Necessary for ROS3 support | |
| - name: Get changed files | |
| id: changed-files | |
| uses: tj-actions/changed-files@v35 | |
| - name: Module changes | |
| id: modules-changed | |
| run: | | |
| for file in ${{ steps.changed-files.outputs.all_changed_files }}; do | |
| if [[ $file == *"/nwbextractors.py" || $file == *"/iblstreamingrecording.py"* ]]; then | |
| echo "Streaming files changed changed" | |
| echo "STREAMING_CHANGED=true" >> $GITHUB_OUTPUT | |
| fi | |
| done | |
| - name: Install package and streaming extractor dependencies | |
| if: ${{ steps.modules-changed.outputs.STREAMING_CHANGED == 'true' }} | |
| run: pip install -e .[test_core,streaming_extractors] | |
| # Temporary disabled because of complicated error with path | |
| # - name: Install h5py with ROS3 support and test it works | |
| # run: | | |
| # pip uninstall -y h5py | |
| # conda install -c conda-forge "h5py>=3.2" | |
| # python -c "import h5py; assert 'ros3' in h5py.registered_drivers(), f'ros3 suppport not available, failed to install'" | |
| - name: run tests | |
| if: steps.modules-changed.outputs.STREAMING_CHANGED == 'true' | |
| run: pytest -m "streaming_extractors and not ros3_test" -vv -ra |