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Cleanup travis (#38)
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* Cleanup travis and set mpl version 3.2.2
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alejoe91 authored Aug 25, 2020
1 parent 63d7e67 commit cba8c8b
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16 changes: 3 additions & 13 deletions .travis.yml
Original file line number Diff line number Diff line change
Expand Up @@ -4,28 +4,18 @@ os:
- linux
python:
- '3.6'
sudo: enabled
addons:
apt:
packages:
- libopenmpi-dev
- libglib2.0-0
- libgl1-mesa-glx
- qt5-default
- packagekit-gtk3-module
- libcanberra-gtk-module
install:
- pip install requests
- pip install https://github.com/SpikeInterface/spikeextractors/archive/master.zip
- pip install https://github.com/SpikeInterface/spikesorters/archive/master.zip
- pip install https://github.com/SpikeInterface/spiketoolkit/archive/master.zip
- pip install https://github.com/SpikeInterface/spikewidgets/archive/master.zip
- pip install .
- pip install pytest==4.3
- pip install matplotlib==3.2.2
- pip install herdingspikes==0.3.7
- pip install pyqt5==5.13
- pip install hdbscan
- pip install tridesclous==1.6.0
- pip install herdingspikes==0.3.6
- pip install pytest==4.3
script: python -m pytest
deploy:
provider: pypi
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3 changes: 3 additions & 0 deletions spikecomparison/tests/test_groundtruthstudy.py
Original file line number Diff line number Diff line change
Expand Up @@ -7,6 +7,7 @@

import spikeextractors as se

import spikesorters as ss
from spikecomparison.groundtruthstudy import GroundTruthStudy

study_folder = 'test_groundtruthstudy/'
Expand Down Expand Up @@ -34,6 +35,8 @@ def _setup_comparison_study():
def _run_study_sorters():
study = GroundTruthStudy(study_folder)
sorter_list = ['tridesclous', 'herdingspikes']
print(f"\n#################################\nINSTALLED SORTERS\n#################################\n"
f"{ss.installed_sorters()}")
study.run_sorters(sorter_list)


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