SubseqEmbed creates embeddings of sequences using random subsequences.
Clone SubseqEmbed from github
Use the following to compile SubseqEmbed:
cd SubseqEmbed
mkdir build && cd build
cmake -DCMAKE_BUILD_TYPE=Release ..
make -j
This should create an executable SubseqEmbed within the build/ directory.
Check the usage information of SubseqEmbed and its subcommands:
build/SubseqEmbed [SUBCOMMAND] --help