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Finish balancing PR #667

Merged
merged 22 commits into from
Sep 2, 2023
Merged

Finish balancing PR #667

merged 22 commits into from
Sep 2, 2023

Commits on Aug 2, 2023

  1. Adds balancing code and tests

    @LalitChauhan56
    LalitChauhan56 committed Aug 2, 2023
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Commits on Aug 4, 2023

  1. Update to master

    @LalitChauhan56
    LalitChauhan56 committed Aug 4, 2023
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  2. Merge branch 'master' into balance

    @LalitChauhan56
    LalitChauhan56 committed Aug 4, 2023
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  3. Update tests

    @LalitChauhan56
    LalitChauhan56 committed Aug 4, 2023
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  4. Merge branch 'SciML:master' into balance

    @LalitChauhan56
    LalitChauhan56 authored Aug 4, 2023
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Commits on Aug 8, 2023

  1. Change file name

    @LalitChauhan56
    LalitChauhan56 committed Aug 8, 2023
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  2. Update Catalyst.jl

    @LalitChauhan56
    LalitChauhan56 committed Aug 8, 2023
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Commits on Aug 9, 2023

  1. Add tests, modify balancing logic

    @LalitChauhan56
    LalitChauhan56 committed Aug 9, 2023
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Commits on Aug 17, 2023

  1. Rational approach from start to end 

    Adds backward_substitution function, eliminates rounding completely and avoids floating point numbers
    @LalitChauhan56
    LalitChauhan56 committed Aug 17, 2023
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  2. Separate balancing test file

    @LalitChauhan56
    LalitChauhan56 committed Aug 17, 2023
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Commits on Aug 18, 2023

  1. Change filename back to previous name

    @LalitChauhan56
    LalitChauhan56 committed Aug 18, 2023
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  2. Update Catalyst.jl

    @LalitChauhan56
    LalitChauhan56 committed Aug 18, 2023
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  3. Final renaming file

    @LalitChauhan56
    LalitChauhan56 committed Aug 18, 2023
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  4. Update Catalyst.jl

    @LalitChauhan56
    LalitChauhan56 committed Aug 18, 2023
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Commits on Aug 22, 2023

  1. Add more tests, optimize logic

    @LalitChauhan56
    LalitChauhan56 committed Aug 22, 2023
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Commits on Aug 29, 2023

  1. Use nullspace to get stoichiometries

    @LalitChauhan56
    LalitChauhan56 committed Aug 29, 2023
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  2. Fix test

    @LalitChauhan56
    LalitChauhan56 committed Aug 29, 2023
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Commits on Aug 30, 2023

  1. Return a vector of Reactions when the nullspace dimension is greater … 

    …than 1
    @LalitChauhan56
    LalitChauhan56 committed Aug 30, 2023
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Commits on Sep 1, 2023

  1. cleanup code and handle edge cases

    @isaacsas
    isaacsas committed Sep 1, 2023
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  2. format

    @isaacsas
    isaacsas committed Sep 1, 2023
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  3. Merge remote-tracking branch 'origin/master' into pr/657

    @isaacsas
    isaacsas committed Sep 1, 2023
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  4. try using enumerate instead of pairs

    @isaacsas
    isaacsas committed Sep 1, 2023
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