This repository contains tools and workflows for building machine learning models to identify and annotate protein complexes in 3D cellular images. By leveraging cryo-electron tomography (cryoET) data, the project aims to advance our ability to understand protein interactions in their natural environments.
THIS IS WORK IN PROGRESS!
- Make sure conda or mamba is installed.
- If you don't have a conda installation yet we recommend micromamba
- Create the environment with all required dependencies:
mamba env create -f environment.yaml - Activate the environment:
mamba activate protein-challenge - Install the package:
pip install -e .