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WIP: Iterative IC generation#66

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mladenivkovic wants to merge 69 commits intomasterSWIFTSIM/swiftsimio:masterfrom ICSWIFTSIM/swiftsimio:ICCopy head branch name to clipboard

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Commits

Commits on Jul 22, 2020

• initial commit of a working version

  mladenivkovic

  committed
  0403bdd

Commits on Jul 23, 2020

• moved globals to a dict

  mladenivkovic

  committed
  fbdfd6b

• added 3D kernels

  mladenivkovic

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  292b2fe

• added quick kernel test

  mladenivkovic

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  769d14c

• import errors

  mladenivkovic

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  37867ee

Commits on Jul 24, 2020

• x is now 3D array always. Differentiating between icSimParams and icRunParams dicts.

  mladenivkovic

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  a900d86

• using scipy cKDTree now for smoothing lengths and neighbour searches.

  mladenivkovic

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  3f1c01b

Commits on Jul 25, 2020

• boxsize is now unyt array

  mladenivkovic

  committed
  4ce5c8b

• naive coordinate generation now works with unyt

  mladenivkovic

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  2049912

Commits on Jul 26, 2020

• bugfixes and cleanups

  mladenivkovic

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  1b572c1

• updated docstrings

  mladenivkovic

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  c0fa221

• added tmp dir for simplicity

  mladenivkovic

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  3c664d7

• formatting

  mladenivkovic

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  9b87ac1

• cleanup with pycharm

  mladenivkovic

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  8692901

• added random seed parameter

  mladenivkovic

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  3d9536f

• added reduction of redistribution fraction

  mladenivkovic

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  110f1d6

• line breaks

  mladenivkovic

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  2390ae7

• added niter to stats dict

  mladenivkovic

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  7dbd736

• delta_init can be generated automatically now

  mladenivkovic

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  4627862

• added 3D case plotting

  mladenivkovic

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  408353e

• boxsizeToUse is now numpy array, not unyt

  mladenivkovic

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  7795323

Commits on Jul 27, 2020

• small fixes

  mladenivkovic

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  9db5cf6

• added intermediate file dump

  mladenivkovic

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  6f674fe

• renamed dict keywords

  mladenivkovic

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  b7746df

• added example script

  mladenivkovic

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  1108895

• formatting

  mladenivkovic

  committed
  f7ba8ec

• small fix

  mladenivkovic

  committed
  b516efb

• adapted kernels following Josh's suggestions

  mladenivkovic

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  fab1396

• variable name conventions

  mladenivkovic

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  3242b6b

• various small fixes

  mladenivkovic

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  63dce5a

• small fixes & parameters are objects now everywhere. Code works.

  mladenivkovic

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  b6f5ad8

• added filename option for intermediate dumps

  mladenivkovic

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  7a25eb1

• moved plotting to its own file

  mladenivkovic

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  33688a2

• added check for boxsize being unyt_array

  mladenivkovic

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  e4d3abe

• fix for files in temp

  mladenivkovic

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  9531049

Commits on Jul 28, 2020

• first commit for full class

  mladenivkovic

  committed
  767e37f

Commits on Jul 29, 2020

• better version of OOP

  mladenivkovic

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  5e5b377

• cleanup and improvements

  mladenivkovic

  committed
  d79de0f

• sped up plotting

  mladenivkovic

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  bc723f7

• added unit system instead of unit l

  mladenivkovic

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  448dc80

• small fixes, added warning if max displ > 5

  mladenivkovic

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  c8e4fb0

• small fixes; added stats object

  mladenivkovic

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  14651db

• added iter_min parameter

  mladenivkovic

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  16288e4

• renamed functions

  mladenivkovic

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  f575a9e

• docstrings - read'em and weep!

  mladenivkovic

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  4e16732

• forgot kernel data in __init__

  mladenivkovic

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  b9ca5ff

Commits on Jul 31, 2020

• added restarting feature

  mladenivkovic

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  f4fe3b2

• cleanups for Josh <3

  mladenivkovic

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  f45568f

Commits on Aug 3, 2020

• added documentation

  mladenivkovic

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  d89c74d

• removing tmp folder

  mladenivkovic

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  23f2a04

• documentation fixes, separated in multiple files to be included

  mladenivkovic

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  994c961

• small fixes

  mladenivkovic

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  496092f

• initial commit unit tests for IC

  mladenivkovic

  committed
  173904f

• minor fix

  mladenivkovic

  committed
  599c7f2

Commits on Aug 4, 2020

• travis is being a beautiful intelligent tremendously clever helper

  mladenivkovic

  committed
  cab44ff

• small fix

  mladenivkovic

  committed
  032571c

Commits on Aug 5, 2020

• added check for particle proximity. fixes travis issue.

  mladenivkovic

  committed
  c955912

Commits on Aug 6, 2020

• cleaned up printing, plotting, and documentation

  mladenivkovic

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  b78ac23

Commits on Aug 7, 2020

• adapted some variable names

  mladenivkovic

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  922b07d

• Cleaned up ParticleGenerator

  JBorrow

  committed
  7c82509

• Cleaned up the rest

  JBorrow

  committed
  057f70c

• Removed cash back to unyt arrays - not necessary if we modify the underlying numpy array directly.

  JBorrow

  committed
  04ed329

• Merge pull request #70 from SWIFTSIM/ICJosh

  Show description for 6f20ecc
  mladenivkovic

  authored
  6f20ecc

Commits on Aug 9, 2020

• various fixes, but mainly random generator seed is local now

  mladenivkovic

  committed
  b1825a4

• small fixes for consistency

  mladenivkovic

  committed
  8e70ed8

• Merge pull request #71 from SWIFTSIM/ICmladen

  Show description for 403d0ae
  mladenivkovic

  authored
  403d0ae

Commits on Aug 24, 2020

• fix for boxsize for tree

  mladenivkovic

  committed
  57d2abf

• removed initial random seed

  mladenivkovic

  committed
  2a3e51e

Commits on Jun 25, 2021

• small fix for consistency with documentation

  mladenivkovic

  committed
  bebf529