Update check-jupyter.yml #200
Workflow file for this run
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name: Test Notebooks | |
on: | |
push: | |
branches: | |
- '*' | |
pull_request: | |
branches: | |
- '*' | |
jobs: | |
test-notebooks: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout repository | |
uses: actions/checkout@v2 | |
- name: Set up Python | |
uses: actions/setup-python@v3 | |
with: | |
python-version: 3.8 | |
- name: Check - Install dependencies | |
run: | | |
echo -e "\n\n ---------------- Doing install of pip BELOW ---- \n" | |
python -m pip install --upgrade pip | |
echo -e "\n\n ------- Doing pip install of jupyter BELOW ----\n" | |
pip install jupyter nbformat nbconvert | |
echo -e "\n\n ------- Doing install of R BELOW ----- \n" | |
sudo apt install r-base r-base-dev -y | |
echo -e "\n\n -------- Starting R BELOW ----- \n" | |
R --vanilla << EOF | |
install.packages('IRkernel') | |
IRkernel::installspec() | |
EOF | |
echo -e "\n\n ------- Listing the kernels installed BELOW ----\n" | |
jupyter kernelspec list | |
- name: Execute Notebooks | |
run: | | |
echo -e "\n\n\n\n -------- Finding and checking the Jupyter notebooks BELOW ----- \n\n" | |
find tutorials/notebooks/* -name '*.ipynb' -exec jupyter nbconvert --to notebook --execute {} + | |
- name: Check for errors | |
run: | | |
if [ $? -ne 0 ]; then | |
echo "Notebook execution failed." | |
exit 1 | |
fi | |