Skip to content

Commit

Permalink
hardening post
Browse files Browse the repository at this point in the history
  • Loading branch information
sr320 committed Aug 29, 2024
1 parent b3392b2 commit 7673e23
Show file tree
Hide file tree
Showing 10 changed files with 1,972 additions and 217 deletions.
39 changes: 32 additions & 7 deletions docs/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -412,7 +412,32 @@ <h5 class="no-anchor card-title listing-title">
</div>
</a>
</div>
<div class="g-col-1" data-index="1" data-categories="education" data-listing-date-sort="1724050800000" data-listing-file-modified-sort="1724098743122" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="1" data-listing-word-count-sort="174">
<div class="g-col-1" data-index="1" data-categories="oyster,stress" data-listing-date-sort="1724310000000" data-listing-file-modified-sort="1724964734497" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="4" data-listing-word-count-sort="680">
<a href="./posts/frontpage/sr320-usda-report/index.html" class="quarto-grid-link">
<div class="quarto-grid-item card h-100 card-left">
<p class="card-img-top">
<img src="http://gannet.fish.washington.edu/seashell/snaps/Monosnap_Monosnap_2024-08-29_13-10-49.png" class="thumbnail-image card-img" style="height: 150px;">
</p>
<div class="card-body post-contents">
<h5 class="no-anchor card-title listing-title">
Hatchery-based Environmental Conditioning Activities
</h5>
<div class="card-text listing-description">
an annual progress report
</div>
<div class="card-attribution card-text-small justify">
<div class="listing-author">

</div>
<div class="listing-date">
Aug 22, 2024
</div>
</div>
</div>
</div>
</a>
</div>
<div class="g-col-1" data-index="2" data-categories="education" data-listing-date-sort="1724050800000" data-listing-file-modified-sort="1724098743122" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="1" data-listing-word-count-sort="174">
<a href="./posts/frontpage/sr320-intertidal/index.html" class="quarto-grid-link">
<div class="quarto-grid-item card h-100 card-left">
<p class="card-img-top">
Expand All @@ -437,7 +462,7 @@ <h5 class="no-anchor card-title listing-title">
</div>
</a>
</div>
<div class="g-col-1" data-index="2" data-categories="oyster,presentation" data-listing-date-sort="1722927600000" data-listing-file-modified-sort="1723661418263" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="3" data-listing-word-count-sort="469">
<div class="g-col-1" data-index="3" data-categories="oyster,presentation" data-listing-date-sort="1722927600000" data-listing-file-modified-sort="1723661418263" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="3" data-listing-word-count-sort="469">
<a href="./posts/frontpage/sr320-ostras/index.html" class="quarto-grid-link">
<div class="quarto-grid-item card h-100 card-left">
<p class="card-img-top">
Expand All @@ -462,7 +487,7 @@ <h5 class="no-anchor card-title listing-title">
</div>
</a>
</div>
<div class="g-col-1" data-index="3" data-categories="salmon,epigenetics" data-listing-date-sort="1719817200000" data-listing-file-modified-sort="1723663050843" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="358">
<div class="g-col-1" data-index="4" data-categories="salmon,epigenetics" data-listing-date-sort="1719817200000" data-listing-file-modified-sort="1723663050843" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="358">
<a href="./posts/frontpage/sr320-lice/index.html" class="quarto-grid-link">
<div class="quarto-grid-item card h-100 card-left">
<p class="card-img-top">
Expand All @@ -487,7 +512,7 @@ <h5 class="no-anchor card-title listing-title">
</div>
</a>
</div>
<div class="g-col-1" data-index="4" data-categories="methods,tools" data-listing-date-sort="1715238000000" data-listing-file-modified-sort="1715463826448" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="291">
<div class="g-col-1" data-index="5" data-categories="methods,tools" data-listing-date-sort="1715238000000" data-listing-file-modified-sort="1715463826448" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="291">
<a href="./posts/frontpage/sr320-enrich/index.html" class="quarto-grid-link">
<div class="quarto-grid-item card h-100 card-left">
<p class="card-img-top">
Expand All @@ -512,7 +537,7 @@ <h5 class="no-anchor card-title listing-title">
</div>
</a>
</div>
<div class="g-col-1" data-index="5" data-categories="methods,tools" data-listing-date-sort="1714978800000" data-listing-file-modified-sort="1715464353655" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="400">
<div class="g-col-1" data-index="6" data-categories="methods,tools" data-listing-date-sort="1714978800000" data-listing-file-modified-sort="1715464353655" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="400">
<a href="./posts/frontpage/ariana-hatchery/index.html" class="quarto-grid-link">
<div class="quarto-grid-item card h-100 card-left">
<p class="card-img-top">
Expand All @@ -537,7 +562,7 @@ <h5 class="no-anchor card-title listing-title">
</div>
</a>
</div>
<div class="g-col-1" data-index="6" data-categories="oyster,aquaculture" data-listing-date-sort="1709884800000" data-listing-file-modified-sort="1710026457573" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="391">
<div class="g-col-1" data-index="7" data-categories="oyster,aquaculture" data-listing-date-sort="1709884800000" data-listing-file-modified-sort="1710026457573" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="391">
<a href="./posts/frontpage/sr320-oyster_stage/index.html" class="quarto-grid-link">
<div class="quarto-grid-item card h-100 card-left">
<p class="card-img-top">
Expand All @@ -562,7 +587,7 @@ <h5 class="no-anchor card-title listing-title">
</div>
</a>
</div>
<div class="g-col-1" data-index="7" data-categories="methods,tools" data-listing-date-sort="1706860800000" data-listing-file-modified-sort="1706924840453" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="250">
<div class="g-col-1" data-index="8" data-categories="methods,tools" data-listing-date-sort="1706860800000" data-listing-file-modified-sort="1706924840453" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="250">
<a href="./posts/frontpage/sr320-prep/index.html" class="quarto-grid-link">
<div class="quarto-grid-item card h-100 card-left">
<p class="card-img-top">
Expand Down
66 changes: 65 additions & 1 deletion docs/index.xml
Original file line number Diff line number Diff line change
Expand Up @@ -19,6 +19,7 @@
<p>As part of our ongoing commitment to fostering innovative research, this summer was particularly thrilling due to the strides made in the <a href="https://www.washington.edu/omad/louis-stokes-alliance-for-minority-participation/">LSAMP Scientist Program</a>. One of our standout projects, led by an ambitious student researcher, Colby Elvrum, brought new insights into the resilience of oysters against environmental stressors. Get a <a href="https://genefish.wordpress.com/author/colbyelvrum/">first hand account of all of Colby’s science from his notebook!</a></p>
<section id="the-genesis-of-the-study" class="level3">
<h3 class="anchored" data-anchor-id="the-genesis-of-the-study">The Genesis of the Study</h3>
Expand All @@ -30,7 +31,7 @@
<div class="quarto-figure quarto-figure-center">
<figure class="figure">
<p><img src="http://gannet.fish.washington.edu/seashell/snaps/2024-08-21_11-33-23.png" class="img-fluid figure-img"></p>
<figcaption class="figure-caption">Colby presenting his research at the Summer Research Symposium</figcaption>
<figcaption>Colby presenting his research at the Summer Research Symposium</figcaption>
</figure>
</div>
</section>
Expand Down Expand Up @@ -61,6 +62,69 @@
<pubDate>Thu, 22 Aug 2024 07:00:00 GMT</pubDate>
<media:content url="http://gannet.fish.washington.edu/seashell/snaps/2024-08-21_11-42-08.png" medium="image" type="image/png"/>
</item>
<item>
<title>Hatchery-based Environmental Conditioning Activities</title>
<link>https://faculty.washington.edu/sr320/posts/frontpage/sr320-usda-report/</link>
<description><![CDATA[
<p>During this past year a series of hatchery-based environmental conditioning activities (referred to as hardening) were completed with oysters out-planted onto three farms to evaluate performance. Additionally, climate resiliency was assessed in hardened oysters under controlled conditions.</p>
<div class="quarto-figure quarto-figure-center">
<figure class="figure">
<p><img src="http://gannet.fish.washington.edu/seashell/snaps/Monosnap_overview.png_2024-08-29_13-35-45.png" class="img-fluid figure-img"></p>
<figcaption>Experimental Overview</figcaption>
</figure>
</div>
<p>Early in the season, a cohort of oysters were subject to (a) daily thermal hardening for approximately two weeks prior to out planting in hanging bags on a farm in Sequim Bay, alongside a control group. These oyster will be assessed in early Autumn 2024. Later in the season oysters were subjected to a more diverse series of hardening conditions with oyster split between two commercial farms, one located in Willapa Bay and a second in the San Juan Islands. The combination of age classes and hardening conditions were as follows: b) small seed / daily thermal hardening, c) adult / daily thermal hardening, d) small seed / weekly thermal hardening, e1) large seed / weekly thermal hardening, e2) large seed / weekly zero salinity hardening. These hardening activities spanned from several weeks to months. For all hardening efforts controls were also outplanted. Oysters out planted in Willapa Bay will be assessed for survival and growth in early September 2024. Oysters out planted in the San Juan Islands have be subject to more routine monitoring. At this site we are currently observing a trend where oysters subjected to the daily hardening regime are surviving better than controls.</p>
<div class="quarto-figure quarto-figure-center">
<figure class="figure">
<p><img src="http://gannet.fish.washington.edu/seashell/snaps/Monosnap_Monosnap_2024-08-29_13-37-09.png" class="img-fluid figure-img"></p>
<figcaption>Wescott Bay Outplanting</figcaption>
</figure>
</div>
<p>To assess the effectiveness of hardening within a hatchery setting, four ages classes of oysters were examined: adults (40-100mm), juveniles (20-55mm), seed (6-15mm), and spat ()1-6mm). In order to assess hardening potential and environmental memory, oysters were subject to an initial chronic temperature stress, then subjected to a secondary stress to see if the response to secondary stress was impacted by initial exposure. During the chronic temperature stress period, oysters from each age class were exposed to a daily 25ºC temperature spike. This repeated for 14 days starting on October 1. Control oysters from each cohort were maintained at an ambient temperature of approximately 17ºC during the same time period.</p>
<div class="quarto-figure quarto-figure-center">
<figure class="figure">
<p><img src="http://gannet.fish.washington.edu/seashell/snaps/Monosnap_env_hardening..._-_Google_Slides_2024-08-29_13-38-28.png" class="img-fluid figure-img"></p>
<figcaption>Hardening and acute stress temperature timeline</figcaption>
</figure>
</div>
<p>Adult oysters in stress conditions were also subject to mechanical stress at day 1, 7, and 48, which was induced by 15 minutes. At day 147 (7 weeks after initial chronic stress), both stressed and non-stressed adult, juvenile, spat, and seed were subjected to a secondary stress of 30 minutes in 32ºC. Gill tissue was sampled immediately after and placed into RNAlater. Spat and seed that were too small to dissect gill tissue were sampled whole with all tissue used in gene expression assays. To date we have analyzed gene expression data from seed and spat. There was no mortality during this trial. Hardening increased growth (compared to controls) in spat. Further there was a reduced transcriptional response in spat. These data suggest temperature hardening of spat could result in a resiliency to later temperature stress whereby energy resources could favor growth.</p>
<div class="quarto-figure quarto-figure-center">
<figure class="figure">
<p><img src="http://gannet.fish.washington.edu/seashell/snaps/Monosnap_env_hardening..._-_Google_Slides_2024-08-29_13-39-30.png" class="img-fluid figure-img"></p>
<figcaption>Growth Performance</figcaption>
</figure>
</div>
<div class="quarto-figure quarto-figure-center">
<figure class="figure">
<p><img src="http://gannet.fish.washington.edu/seashell/snaps/Monosnap_env_hardening..._-_Google_Slides_2024-08-29_13-40-09.png" class="img-fluid figure-img"></p>
<figcaption>Gene expression profiles (spat)</figcaption>
</figure>
</div>
<div class="quarto-figure quarto-figure-center">
<figure class="figure">
<p><img src="http://gannet.fish.washington.edu/seashell/snaps/Monosnap_env_hardening..._-_Google_Slides_2024-08-29_13-40-54.png" class="img-fluid figure-img"></p>
<figcaption>Schematic physiology explanation when hardened spat are exposed to acute temperature stress.</figcaption>
</figure>
</div>
<p>In a second experimental regime, juvenile oysters were subjected to four hardening conditions 1) high temperature (35°C), 2) high temperature and freshwater, 3) freshwater, and 4) poly I:C immersion. These were exposures that occurred every other day for about 3 weeks. Approximately 1 month after hardening, oysters were brought to the lab and subjected to metabolic assessment using resazurin at 18°C and 42°C. Resazurin is a dye that is commonly used in cell viability, and it works by changing color as an organism consumes oxygen. Survival was assessed during the resazurin assay and 24 hours later. To date, our analysis suggests metabolic activity of the 42°C oysters was higher in the control oysters than previously hardened oysters. In the near future we will assess the relationship of metabolic activity and survival however it appears higher metabolic rate directly correlates with mortality. Taken together these sets of controlled experiments suggest hardening does have an impact on resiliency, though dependent on age, hardening duration, and subsequent environmental conditions.</p>
<p><img src="http://gannet.fish.washington.edu/seashell/snaps/Monosnap_logo-resazuring_2024-08-29_13-50-31.png" class="img-fluid" alt="Resazurin assay (4 hour / 2 temperatures) on hardened oysters"></p>
<!-- -->
]]></description>
<category>oyster</category>
<category>stress</category>
<guid>https://faculty.washington.edu/sr320/posts/frontpage/sr320-usda-report/</guid>
<pubDate>Thu, 22 Aug 2024 07:00:00 GMT</pubDate>
<media:content url="http://gannet.fish.washington.edu/seashell/snaps/Monosnap_Monosnap_2024-08-29_13-10-49.png" medium="image" type="image/png"/>
</item>
<item>
<title>Intertidal Innovators</title>
<link>https://faculty.washington.edu/sr320/posts/frontpage/sr320-intertidal/</link>
Expand Down
2 changes: 2 additions & 0 deletions docs/listings.json
Original file line number Diff line number Diff line change
Expand Up @@ -2,6 +2,7 @@
{
"listing": "/posts.html",
"items": [
"/posts/frontpage/sr320-usda-report/index.html",
"/posts/frontpage/sr320-lsamp/index.html",
"/posts/frontpage/sr320-intertidal/index.html",
"/posts/frontpage/sr320-ostras/index.html",
Expand Down Expand Up @@ -81,6 +82,7 @@
"listing": "/index.html",
"items": [
"/posts/frontpage/sr320-lsamp/index.html",
"/posts/frontpage/sr320-usda-report/index.html",
"/posts/frontpage/sr320-intertidal/index.html",
"/posts/frontpage/sr320-ostras/index.html",
"/posts/frontpage/sr320-lice/index.html",
Expand Down
Loading

0 comments on commit 7673e23

Please sign in to comment.