…xceptions/thread.view?entityId=14a60bd2-3604-103d-a666-22f53556a042&_anchor=65275 a call to ViewLibraryDlg.AddAllPeptides with an water loss adduct on a molecule with no O in it throws an exception. Instead, let's just skip it and put a warning in the immediate window. (Ideally it wouldn't be in the library in the first place, but we don't have any data on how the library was created)

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public class InvalidChemicalModificationException : IOException
which is thrown when a loss would remove more atoms than are found in a molecular formula e.g. water loss from C2S5H12 (no oxygen), or label would change more atoms than are in the formula e.g. 3C' on C2S5H12

We now catch this exception in LibraryExplorer and adjust display accordingly

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…_mismatch' of https://github.com/ProteoWizard/pwiz into Skyline/work/20240807_graceful_handling_adduct_molecule_mismatch

…duct_molecule_mismatch

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…_mismatch' of https://github.com/ProteoWizard/pwiz into Skyline/work/20240807_graceful_handling_adduct_molecule_mismatch

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* Fix a bug in m/z calculation where the mass of the adduct was not being added to molecules described only as a mass with no chemical formula. (#3151)

…k/20240807_graceful_handling_adduct_molecule_mismatch

…duct_molecule_mismatch

…duct_molecule_mismatch

…duct_molecule_mismatch

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Show the spectrum even if m/z can't be calculated

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…_mismatch' of https://github.com/ProteoWizard/pwiz into Skyline/work/20240807_graceful_handling_adduct_molecule_mismatch