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use reusable pytest action from geonature
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bouttier committed Oct 17, 2024
1 parent c0b7f52 commit d3c5372
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118 changes: 4 additions & 114 deletions .github/workflows/pytest.yml
Original file line number Diff line number Diff line change
Expand Up @@ -3,122 +3,12 @@ name: pytest
on:
push:
branches:
- master
- hotfixes
- main
- develop
- workshop
pull_request:
branches:
- master
- hotfixes
- develop
- workshop

jobs:
build:
runs-on: ubuntu-latest

strategy:
fail-fast: false
matrix:
debian-version: ["11", "12"]
include:
- debian-version: "11"
python-version: "3.9"
postgres-version: 13
postgis-version: 3.2
- debian-version: "12"
python-version: "3.9"
postgres-version: 15
postgis-version: 3.3

name: Debian ${{ matrix.debian-version }}

services:
postgres:
image: postgis/postgis:${{ matrix.postgres-version }}-${{ matrix.postgis-version }}
env:
POSTGRES_DB: geonature2db
POSTGRES_PASSWORD: geonatpasswd
POSTGRES_USER: geonatadmin
ports:
- 5432:5432
options: >-
--health-cmd pg_isready
--health-interval 10s
--health-timeout 5s
--health-retries 5
redis:
image: redis
ports:
- 6379:6379
options: >-
--health-cmd "redis-cli ping"
--health-interval 10s
--health-timeout 5s
--health-retries 5
steps:
- name: Add postgis_raster database extension
if: ${{ matrix.postgis-version >= 3 }}
run: |
psql -h localhost -U geonatadmin -d geonature2db -tc 'CREATE EXTENSION "postgis_raster";'
env:
PGPASSWORD: geonatpasswd
- name: Add database extensions
run: |
psql -h localhost -U geonatadmin -d geonature2db -tc 'CREATE EXTENSION "hstore";'
psql -h localhost -U geonatadmin -d geonature2db -tc 'CREATE EXTENSION "uuid-ossp";'
psql -h localhost -U geonatadmin -d geonature2db -tc 'CREATE EXTENSION "pg_trgm";'
psql -h localhost -U geonatadmin -d geonature2db -tc 'CREATE EXTENSION "unaccent";'
env:
PGPASSWORD: geonatpasswd
- uses: actions/checkout@v2
with:
submodules: recursive
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Install GDAL
run: |
sudo apt update
sudo apt install -y libgdal-dev
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install \
-e ..[tests] \
-r requirements-dev.txt
working-directory: ./dependencies/GeoNature/backend
- name: Install database
run: |
geonature db upgrade geonature@head -x local-srid=2154
geonature db autoupgrade -x local-srid=2154
geonature taxref import-v15 --skip-bdc-statuts
geonature db upgrade geonature-samples@head
geonature db upgrade nomenclatures_taxonomie_data@head
geonature db upgrade ref_geo_fr_departments@head
geonature db upgrade ref_geo_fr_municipalities@head
geonature db upgrade ref_geo_inpn_grids_10@head
env:
GEONATURE_CONFIG_FILE: dependencies/GeoNature/config/test_config.toml
- name: Install export module backend
run: |
pip install -r requirements-dev.in
pip install .
- name: Install import module database
run: |
geonature upgrade-modules-db EXPORTS
env:
GEONATURE_CONFIG_FILE: dependencies/GeoNature/config/test_config.toml
- name: Test with pytest
run: |
pytest -v --cov --cov-report xml
env:
GEONATURE_CONFIG_FILE: dependencies/GeoNature/config/test_config.toml
- name: Upload coverage to Codecov
if: ${{ matrix.name == 'Debian 11' }}
uses: codecov/codecov-action@v2
with:
flags: pytest
uses: pnx-si/geonature/.github/workflows/gn-module-pytest.yml@feat/gn-module-pytest
with:
geonature_ref: "develop"
9 changes: 0 additions & 9 deletions .gitmodules

This file was deleted.

1 change: 0 additions & 1 deletion dependencies/GeoNature
Submodule GeoNature deleted from ec1f16
1 change: 0 additions & 1 deletion dependencies/Utils-Flask-SQLAlchemy
Submodule Utils-Flask-SQLAlchemy deleted from 106a75
1 change: 0 additions & 1 deletion dependencies/Utils-Flask-SQLAlchemy-Geo
Submodule Utils-Flask-SQLAlchemy-Geo deleted from 2b5002
2 changes: 0 additions & 2 deletions requirements-dev.in

This file was deleted.

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