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C-PAC 1.8.5 bootstrap updates#42

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shnizzedy wants to merge 34 commits intoPennLINC:mainPennLINC/TheWay:mainfrom FCP-INDI:r-1.8.5FCP-INDI/TheWay:r-1.8.5Copy head branch name to clipboard

+199-40

Commits

Commits on Apr 1, 2021

• add submit script

  mattcieslak

  committed
  54da6ee

• working scripts

  mattcieslak

  committed
  d5b68c8

Commits on Apr 2, 2021

• use explicit for prep run

  mattcieslak

  committed
  2b76e07

Commits on Apr 13, 2021

• Add merging script

  mattcieslak

  committed
  704232b

Commits on Apr 15, 2021

• add projectroot to merge script

  mattcieslak

  committed
  ac0b593

• use arg

  mattcieslak

  committed
  e01188d

• Don't check for conda, use tempdir

  mattcieslak

  committed
  4946f51

Commits on Apr 16, 2021

• space

  mattcieslak

  committed
  b0a3ccc

Commits on Apr 21, 2021

• Write to 2mm mni by default

  mattcieslak

  committed
  c3c092d

• remove double arg

  mattcieslak

  committed
  6efb6dd

Commits on Apr 22, 2021

• run zip with bash

  mattcieslak

  committed
  b3f9fc8

Commits on Apr 29, 2021

• clear out remotes from the containers ds

  mattcieslak

  committed
  037047b

Commits on May 4, 2021

• add script for fmriprep audit

  mattcieslak

  committed
  175eea5

Commits on Jun 9, 2021

• wget a merge script

  mattcieslak

  committed
  48627f3

• new alias

  mb3152

  committed
  8edb98c

Commits on Aug 13, 2021

• Update bootstrap-fmriprep.sh

  scovitz

  authored
  dbe8019

Commits on Aug 18, 2021

• Update bootstrap-fmriprep.sh

  

  scovitz

  authored and

  shnizzedy

  committed
  5ebab29

Commits on Aug 19, 2021

• added garbage collection

  scovitz

  authored
  140c375

Commits on Aug 20, 2021

• 🔀 Merge main into C-PAC-1.8.1-dev

  shnizzedy

  committed
  5b467f2

Commits on Sep 13, 2021

• Update bootstrap-fmriprep.sh

  scovitz

  authored
  cbe3b9e

Commits on Sep 21, 2021

• Update bootstrap-fmriprep.sh (PennLINC#25)

  Show description for f49cec4
  YumekaMengjiaLYU

  authored
  f49cec4

• Update bootstrap-qsirecon.sh (PennLINC#30)

  Show description for 84a5f98
  YumekaMengjiaLYU

  authored
  84a5f98

Commits on Oct 27, 2021

• added reservation flag to qsub_calls.sh

  scovitz

  authored
  25e6dea

• added -h_rt flag for 24h

  scovitz

  authored
  919747a

• Update bootstrap-fmriprep.sh

  scovitz

  authored
  537a722

• Update bootstrap-fmriprep.sh

  scovitz

  authored
  9b86fe6

• Update bootstrap-fmriprep.sh

  scovitz

  authored
  9fd70f1

Commits on Oct 28, 2021

• -r to -R

  scovitz

  authored
  773e0c5

Commits on Nov 1, 2021

• Update bootstrap-fmriprep.sh

  scovitz

  authored
  9f5f4a5

Commits on Jan 7, 2022

• Update bootstrap-fmriprep.sh

  scovitz

  authored
  9f31fd1

Commits on Feb 14, 2022

• Merge branch 'PennLINC:main' into C-PAC-1.8.3

  shnizzedy

  authored
  a5d9037

Commits on Jul 7, 2022

• 🔀 Merge multises setup from fmriprep-multises bootstrap into c-pac bootstrap

  shnizzedy

  committed
  b1583e9

• 🔀 Merge main into C-PAC-1.8.5

  shnizzedy

  committed
  58c4dce

Commits on Jan 5, 2023

• Merge branch 'PennLINC:main' into r-1.8.5

  shnizzedy

  authored
  bc53d12