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297 Open 746 Closed
297 Open 746 Closed
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Issues list

Ontology index files are getting closed bug deploy immediatly Fixes that should be deployed immediatly high priority Issues that require immediate attention
#1257 opened Oct 18, 2024 by arteymix
@arteymix
2
Drop Gemma Groovy Support cleanup Code reorganization and changes that should not impact functionality
#1256 opened Oct 18, 2024 by arteymix 1.32.0
Provide shell completion for loggers and log levels with -v and --logger options cli Issues affecting the CLI enhancement Enhance the code or user experience low priority
#1255 opened Oct 18, 2024 by arteymix
Addressing author-provided batch info bug
#1253 opened Oct 17, 2024 by alexmillett20
@ppavlidis
1
Replace probe with element in the REST API terminology low priority rest-api Issues or pull requests involving the RESTful API
#1251 opened Oct 17, 2024 by arteymix
Modernize URLs enhancement Enhance the code or user experience gui Issues or pull requests involving the Web UI low priority
#1250 opened Oct 17, 2024 by arteymix
Add a mechanism when writing data files to mark them as ready enhancement Enhance the code or user experience low priority
#1249 opened Oct 16, 2024 by arteymix
2
Lint MEX datasets that are downloaded enhancement Enhance the code or user experience single cell Issues related to single-cell data support
#1245 opened Oct 5, 2024 by arteymix
@arteymix
Allow editing QTs when there is no preferred set of vectors bug single cell Issues related to single-cell data support
#1243 opened Oct 4, 2024 by arteymix 1.32.0
@arteymix
2
Missing java bean property to match javascript property: measurement dwr gui Issues or pull requests involving the Web UI low priority
#1240 opened Oct 4, 2024 by arteymix
Replace BusinessKey with declared natural IDs cleanup Code reorganization and changes that should not impact functionality enhancement Enhance the code or user experience low priority
#1239 opened Oct 3, 2024 by arteymix
Replace thaw() with Hibernate fetch profiles cleanup Code reorganization and changes that should not impact functionality enhancement Enhance the code or user experience low priority
#1238 opened Oct 3, 2024 by arteymix
Identify potential issues with gene references and platforms single cell Issues related to single-cell data support
#1234 opened Sep 26, 2024 by arteymix
@arteymix
1
Handle datasets with complete MEX data at both sample and series-level low priority single cell Issues related to single-cell data support
#1232 opened Sep 24, 2024 by arteymix
1
Set lastUpdated to date of creation if no updates present enhancement Enhance the code or user experience rest-api Issues or pull requests involving the RESTful API
#1231 opened Sep 24, 2024 by oganm
1
Support 10x clusters format low priority single cell Issues related to single-cell data support
#1228 opened Sep 17, 2024 by arteymix
Curation interface request: copy and paste function enhancement Enhance the code or user experience gui Issues or pull requests involving the Web UI
#1227 opened Sep 17, 2024 by xnrxng
2
Reload ontologies at runtime enhancement Enhance the code or user experience low priority
#1224 opened Sep 13, 2024 by arteymix
2 tasks
Exclude ontology terms that are not relevant to the active taxa enhancement Enhance the code or user experience low priority
#1223 opened Sep 12, 2024 by arteymix
Error while visualizing DEA results for a data sets bug gui Issues or pull requests involving the Web UI needs confirmation Issues that need to be confirmed or reliably reproduced
#1222 opened Sep 11, 2024 by ppavlidis 1.31.13
@arteymix
Test cases for single cell data loading single cell Issues related to single-cell data support
#1221 opened Sep 10, 2024 by arteymix
1
@arteymix
1
Better provision for submitter-supplied batch information (avoid overwrite by Gemma-generated) enhancement Enhance the code or user experience low priority
#1217 opened Sep 9, 2024 by ppavlidis
Assign cells to coarse cell types when creating pseudo-bulks enhancement Enhance the code or user experience low priority single cell Issues related to single-cell data support
#1216 opened Sep 8, 2024 by arteymix
NullPointerException in ExpressionExperimentController.loadExpressionExperimentDetails() DWR call bug gui Issues or pull requests involving the Web UI high priority Issues that require immediate attention
#1215 opened Sep 7, 2024 by arteymix 1.31.13
@arteymix
1
Support reading cell IDs from MEX datasets with cells.tsv.gz low priority needs confirmation Issues that need to be confirmed or reliably reproduced single cell Issues related to single-cell data support
#1213 opened Aug 27, 2024 by arteymix
1
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