Skip to content

Commit

Permalink
tests: bump core patch version
Browse files Browse the repository at this point in the history
  • Loading branch information
nebfield committed Oct 29, 2024
1 parent 73a5d3d commit d5f27d8
Show file tree
Hide file tree
Showing 3 changed files with 5 additions and 5 deletions.
2 changes: 1 addition & 1 deletion tests/modules/combine/test.yml
Original file line number Diff line number Diff line change
Expand Up @@ -14,4 +14,4 @@
- "effect_weight"
- path: output/combine/versions.yml
contains:
- "pgscatalog.core: 0.3.2"
- "pgscatalog.core: 0.3.3"
4 changes: 2 additions & 2 deletions tests/modules/download/test.yml
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@
- path: output/download/PGS000001_hmPOS_GRCh37.txt.gz
- path: output/download/versions.yml
contains:
- "pgscatalog.core: 0.3.2"
- "pgscatalog.core: 0.3.3"

- name: pgscatalog test --efo_trait --pgp_id and --pgs_id
command: nextflow run ./tests/modules/download -entry testmultipleaccessions -c ./tests/config/nextflow.config
Expand All @@ -24,7 +24,7 @@
- path: output/download/PGS002054_hmPOS_GRCh37.txt.gz
- path: output/download/versions.yml
contains:
- "pgscatalog.core: 0.3.2"
- "pgscatalog.core: 0.3.3"

- name: pgscatalog test bad accession
command: nextflow run ./tests/modules/download -entry testbadaccession -c ./tests/config/nextflow.config
Expand Down
4 changes: 2 additions & 2 deletions tests/subworkflows/test_liftover_run.yml
Original file line number Diff line number Diff line change
Expand Up @@ -11,7 +11,7 @@
- "5297845"
- path: output/combine/versions.yml
contains:
- "pgscatalog.core: 0.3.2"
- "pgscatalog.core: 0.3.3"

- name: test input check subworkflow with liftover 37to38
command: nextflow run main.nf --only_input --scorefile ./assets/examples/scorefiles/customgrch37.txt --liftover --target_build GRCh38 -c ./tests/config/nextflow.config --hg19_chain https://hgdownload.cse.ucsc.edu/goldenpath/hg19/liftOver/hg19ToHg38.over.chain.gz --hg38_chain https://hgdownload.soe.ucsc.edu/goldenPath/hg38/liftOver/hg38ToHg19.over.chain.gz
Expand All @@ -26,4 +26,4 @@
- "5237785"
- path: output/combine/versions.yml
contains:
- "pgscatalog.core: 0.3.2"
- "pgscatalog.core: 0.3.3"

0 comments on commit d5f27d8

Please sign in to comment.