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Updating fatal function tests #20: Commit 2e0f182 pushed by skchronicles
July 11, 2024 20:15 39s main
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July 11, 2024 20:15 39s
Adding script for running hap.py tests #19: Commit e35d174 pushed by skchronicles
July 11, 2024 19:28 40s main
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July 11, 2024 19:28 40s
Test Parabricks DeepVariant germline workflow with best performance o… tests #18: Commit c8b3b05 pushed by skchronicles
July 10, 2024 22:19 40s main
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July 10, 2024 22:19 40s
Adding step to compress and index VCF tests #17: Commit 5912bcd pushed by skchronicles
July 8, 2024 20:54 43s main
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July 8, 2024 20:54 43s
Parabricks haplotypecaller cannot output a bgzip compressed vcf. tests #16: Commit 37094e2 pushed by skchronicles
July 2, 2024 14:29 43s main
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July 2, 2024 14:29 43s
Output gvcf for hap.py benchmarking tests #15: Commit f4d3a88 pushed by skchronicles
July 1, 2024 19:55 41s main
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July 1, 2024 19:55 41s
Patch: --read-from-tmp-dir cannot work with bqsr tests #14: Commit 70bd86e pushed by skchronicles
June 27, 2024 18:16 40s main
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June 27, 2024 18:16 40s
Run partition option cannot be run on a single GPU and is not compati… tests #13: Commit 20cd507 pushed by skchronicles
June 26, 2024 20:53 41s main
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June 26, 2024 20:53 41s
Patch: python3 division of two ints returns a float. tests #12: Commit cc1e0fa pushed by skchronicles
June 26, 2024 17:01 43s main
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June 26, 2024 17:01 43s
Updating perf output file extension and adding 4 GPU ruleset. tests #11: Commit 4f66d61 pushed by skchronicles
June 26, 2024 15:09 43s main
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June 26, 2024 15:09 43s
Decreasing single GPU memory limit in half due to mem spikes. tests #10: Commit be18ac5 pushed by skchronicles
June 25, 2024 19:32 44s main
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June 25, 2024 19:32 44s
Updating attribute name for sbatch submission tests #9: Commit addb83f pushed by skchronicles
June 25, 2024 16:44 40s main
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June 25, 2024 16:44 40s
pages build and deployment pages-build-deployment #1: by skchronicles
June 25, 2024 16:28 26s
June 25, 2024 16:28 26s
Adding parabricks rules to test different hardware configurations tests #8: Commit d28858e pushed by skchronicles
June 25, 2024 16:02 44s main
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June 25, 2024 16:02 44s
Checking for required FASTA index tests #7: Commit 6cc4d7f pushed by skchronicles
June 25, 2024 14:43 48s main
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June 25, 2024 14:43 48s
Updating name of cli docs #3: Commit 6f1f56c pushed by skchronicles
June 25, 2024 14:18 44s main
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June 25, 2024 14:18 44s
Updating name of cli tests #6: Commit 6f1f56c pushed by skchronicles
June 25, 2024 14:18 47s main
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June 25, 2024 14:18 47s
Adding new option to provide genomic fasta file. tests #5: Commit 2ad9da1 pushed by skchronicles
June 24, 2024 23:36 47s main
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June 24, 2024 23:36 47s
Adding benchmarking rule to run parabricks with 1 gpu and normal syst… tests #4: Commit 5f1b242 pushed by skchronicles
June 24, 2024 22:43 45s main
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June 24, 2024 22:43 45s
Adding rule to build BWA MEM index tests #3: Commit 15cde57 pushed by skchronicles
June 24, 2024 21:52 47s main
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June 24, 2024 21:52 47s
Adding config files for testing out GATK germline pipeline. docs #2: Commit 8e98246 pushed by skchronicles
June 24, 2024 20:50 44s main
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June 24, 2024 20:50 44s
Adding config files for testing out GATK germline pipeline. tests #2: Commit 8e98246 pushed by skchronicles
June 24, 2024 20:50 47s main
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June 24, 2024 20:50 47s
Initial commit docs #1: Commit 10c249e pushed by skchronicles
June 24, 2024 18:54 40s main
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June 24, 2024 18:54 40s
Initial commit tests #1: Commit 10c249e pushed by skchronicles
June 24, 2024 18:54 45s main
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June 24, 2024 18:54 45s