Use absolute path to strains fasta file

OpenOmics · Apr 5, 2024 · f20e806 · f20e806
1 parent 6f484c0
commit f20e806
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
@@ -35,7 +35,7 @@ jobs:
         /opt2/.tests/WT_S3_3.fastq.gz /opt2/.tests/WT_S3_4.fastq.gz \
         /opt2/.tests/WT_S4.fastq.gz /opt2/.tests/WT_S5.fastq.gz \
         --output /opt2/output --mode local --batch-id 2024-04-03 \
-        --additional-strains resources/mpox_additional_strains.fa.gz \
+        --additional-strains /opt2/resources/mpox_additional_strains.fa.gz \
         --dry-run
     - name: View the pipeline config file
       run: |