Fixed benchmarks for change of jacobian keys in OpenMDAO 3.31 #10
Workflow file for this run
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| # Run CADRE Tests | |
| name: CADRE Tests | |
| on: | |
| # Trigger on push or pull request events for the master branch | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| # Allow running the workflow manually from the Actions tab | |
| workflow_dispatch: | |
| jobs: | |
| CADRE_tests: | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 120 | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: Display run details | |
| run: | | |
| echo "=============================================================" | |
| echo "Run #${GITHUB_RUN_NUMBER}" | |
| echo "Run ID: ${GITHUB_RUN_ID}" | |
| echo "Testing: ${GITHUB_REPOSITORY}" | |
| echo "Triggered by: ${GITHUB_EVENT_NAME}" | |
| echo "Initiated by: ${GITHUB_ACTOR}" | |
| echo "=============================================================" | |
| - name: Checkout code | |
| uses: actions/checkout@v3 | |
| - name: Setup conda | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| python-version: 3.11 | |
| conda-version: "*" | |
| channels: conda-forge,defaults | |
| channel-priority: true | |
| - name: Create Environment | |
| run: | | |
| conda install numpy=1.23 scipy -q -y | |
| python -m pip install --upgrade pip | |
| python -m pip install six parameterized | |
| python -m pip install openmdao[test] | |
| python -m pip install . | |
| pip install git+https://github.com/OpenMDAO/MBI | |
| - name: Install PETSc | |
| run: | | |
| conda install mpi4py petsc4py -q -y | |
| echo "=============================================================" | |
| echo "Check MPI and PETSc installation" | |
| echo "=============================================================" | |
| export OMPI_MCA_rmaps_base_oversubscribe=1 | |
| echo "-----------------------" | |
| echo "Quick test of mpi4py:" | |
| mpirun -n 3 python -c "from mpi4py import MPI; print(f'Rank: {MPI.COMM_WORLD.rank}')" | |
| echo "-----------------------" | |
| echo "Quick test of petsc4py:" | |
| mpirun -n 3 python -c "import numpy; from mpi4py import MPI; comm = MPI.COMM_WORLD; \ | |
| import petsc4py; petsc4py.init(); \ | |
| x = petsc4py.PETSc.Vec().createWithArray(numpy.ones(5)*comm.rank, comm=comm); \ | |
| print(x.getArray())" | |
| echo "-----------------------" | |
| echo "OMPI_MCA_rmaps_base_oversubscribe=1" >> $GITHUB_ENV | |
| echo "Workaround for intermittent failures with OMPI https://github.com/open-mpi/ompi/issues/7393" | |
| echo "TMPDIR=/tmp" >> $GITHUB_ENV | |
| - name: Display environment info | |
| run: | | |
| conda info | |
| conda list | |
| - name: Run tests | |
| run: | | |
| echo "=============================================================" | |
| echo "Run tests (from directory other than repo root)" | |
| echo "=============================================================" | |
| cd $HOME | |
| testflo -n 1 CADRE --timeout=120 --show_skipped --coverage --coverpkg CADRE | |
| - name: Submit coverage | |
| env: | |
| COVERALLS_REPO_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| COVERALLS_SERVICE_NAME: "github" | |
| COVERALLS_PARALLEL: true | |
| run: | | |
| echo "=============================================================" | |
| echo "Submit coverage" | |
| echo "=============================================================" | |
| cd $HOME | |
| python -m pip install coveralls | |
| SITE_DIR=`python -c 'import site; print(site.getsitepackages()[-1])'` | |
| coveralls --basedir $SITE_DIR | |
| coveralls: | |
| name: Finish coverage | |
| needs: [CADRE_tests] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: coverallsapp/github-action@master | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| parallel-finished: true |