Adding ResultModelManager

DESCRIPTION

@@ -1,8 +1,8 @@
 Package: Hades
 Type: Package
 Title: Health Analytics Data-to-Evidence Suite
-Version: 1.7.0
-Date: 2022-12-12
+Version: 1.8.0
+Date: 2023-01-11
 Authors@R: c(
   person("Martijn", "Schuemie", , "[email protected]", role = c("aut", "cre")),
   person("Observational Health Data Science and Informatics", role = c("cph"))
@@ -41,7 +41,8 @@ Imports:
   OhdsiSharing,
   Hydra,
   IterativeHardThresholding,
-  OhdsiShinyModules
+  OhdsiShinyModules,
+  ResultModelManager
 Remotes:
   ohdsi/BigKnn,
   ohdsi/ROhdsiWebApi,
@@ -63,7 +64,8 @@ Remotes:
   ohdsi/CohortGenerator,
   ohdsi/DeepPatientLevelPrediction,
   ohdsi/CohortExplorer,
-  ohdsi/OhdsiShinyModules
+  ohdsi/OhdsiShinyModules,
+  ohdsi/ResultModelManager
 LazyData: false
 RoxygenNote: 7.2.0
 Encoding: UTF-8

NEWS.md

@@ -1,3 +1,10 @@
+HADES 1.8.0
+===========
+
+Changes
+
+- Adding ResultModelManager to HADES
+
 HADES 1.7.0
 ===========
 

R/Hades.R

@@ -1,4 +1,4 @@
-# Copyright 2022 Observational Health Data Sciences and Informatics
+# Copyright 2023 Observational Health Data Sciences and Informatics
 #
 # This file is part of Hades
 # 

R/Packages.R

@@ -1,4 +1,4 @@
-# Copyright 2022 Observational Health Data Sciences and Informatics
+# Copyright 2023 Observational Health Data Sciences and Informatics
 #
 # This file is part of Hades
 # 

Rmd/packageStatuses.Rmd

@@ -43,6 +43,7 @@ The table below lists, for each of the HADES packages, the following details:
 | [PatientLevelPrediction](https://github.com/OHDSI/PatientLevelPrediction) | [![Version](https://img.shields.io/github/r-package/v/ohdsi/PatientLevelPrediction?label=%20)](https://ohdsi.github.io/PatientLevelPrediction/) | Jenna Reps & Peter Rijnbeek | GitHub | [![Open issues](https://img.shields.io/github/issues-raw/OHDSI/PatientLevelPrediction?label=%20)](https://github.com/OHDSI/PatientLevelPrediction/issues) | [![Open pull-requests](https://img.shields.io/github/issues-pr-raw/OHDSI/PatientLevelPrediction?label=%20)](https://github.com/OHDSI/PatientLevelPrediction/pulls) | [![Build Status](https://github.com/OHDSI/PatientLevelPrediction/workflows/R-CMD-check/badge.svg)](https://github.com/OHDSI/PatientLevelPrediction/actions?query=workflow%3AR-CMD-check) | [![codecov.io](https://codecov.io/github/OHDSI/PatientLevelPrediction/coverage.svg?branch=main)](https://codecov.io/github/OHDSI/PatientLevelPrediction?branch=main) |
 | [PhenotypeLibrary](https://github.com/OHDSI/PhenotypeLibrary) | [![Version](https://img.shields.io/github/r-package/v/ohdsi/PhenotypeLibrary?label=%20)](https://ohdsi.github.io/PhenotypeLibrary/) | Gowtham Rao | GitHub | [![Open issues](https://img.shields.io/github/issues-raw/OHDSI/PhenotypeLibrary?label=%20)](https://github.com/OHDSI/PhenotypeLibrary/issues) | [![Open pull-requests](https://img.shields.io/github/issues-pr-raw/OHDSI/PhenotypeLibrary?label=%20)](https://github.com/OHDSI/PhenotypeLibrary/pulls) | [![Build Status](https://github.com/OHDSI/PhenotypeLibrary/workflows/R-CMD-check/badge.svg)](https://github.com/OHDSI/PhenotypeLibrary/actions?query=workflow%3AR-CMD-check) | [![codecov.io](https://codecov.io/github/OHDSI/PhenotypeLibrary/coverage.svg?branch=main)](https://codecov.io/github/OHDSI/PhenotypeLibrary?branch=main) |
 | [PheValuator](https://github.com/OHDSI/PheValuator) | [![Version](https://img.shields.io/github/r-package/v/ohdsi/PheValuator?label=%20)](https://ohdsi.github.io/PheValuator/) | Joel Swerdel | GitHub | [![Open issues](https://img.shields.io/github/issues-raw/OHDSI/PheValuator?label=%20)](https://github.com/OHDSI/PheValuator/issues) | [![Open pull-requests](https://img.shields.io/github/issues-pr-raw/OHDSI/PheValuator?label=%20)](https://github.com/OHDSI/PheValuator/pulls) | [![Build Status](https://github.com/OHDSI/PheValuator/workflows/R-CMD-check/badge.svg)](https://github.com/OHDSI/PheValuator/actions?query=workflow%3AR-CMD-check) | [![codecov.io](https://codecov.io/github/OHDSI/PheValuator/coverage.svg?branch=main)](https://codecov.io/github/OHDSI/PheValuator?branch=main) |
+| [ResultModelManager](https://github.com/OHDSI/ResultModelManager) | [![Version](https://img.shields.io/github/r-package/v/ohdsi/ResultModelManager?label=%20)](https://ohdsi.github.io/ResultModelManager/) | Jamie Gilbert | GitHub | [![Open issues](https://img.shields.io/github/issues-raw/OHDSI/ResultModelManager?label=%20)](https://github.com/OHDSI/ResultModelManager/issues) | [![Open pull-requests](https://img.shields.io/github/issues-pr-raw/OHDSI/ResultModelManager?label=%20)](https://github.com/OHDSI/ResultModelManager/pulls) | [![Build Status](https://github.com/OHDSI/ResultModelManager/workflows/R-CMD-check/badge.svg)](https://github.com/OHDSI/ResultModelManager/actions?query=workflow%3AR-CMD-check) | [![codecov.io](https://codecov.io/github/OHDSI/ResultModelManager/coverage.svg?branch=main)](https://codecov.io/github/OHDSI/ResultModelManager?branch=main) |
 | [ROhdsiWebApi](https://github.com/OHDSI/ROhdsiWebApi) | [![Version](https://img.shields.io/github/r-package/v/ohdsi/ROhdsiWebApi?label=%20)](https://ohdsi.github.io/ROhdsiWebApi/) | Gowtham Rao | GitHub | [![Open issues](https://img.shields.io/github/issues-raw/OHDSI/ROhdsiWebApi?label=%20)](https://github.com/OHDSI/ROhdsiWebApi/issues) | [![Open pull-requests](https://img.shields.io/github/issues-pr-raw/OHDSI/ROhdsiWebApi?label=%20)](https://github.com/OHDSI/ROhdsiWebApi/pulls) | [![Build Status](https://github.com/OHDSI/ROhdsiWebApi/workflows/R-CMD-check/badge.svg)](https://github.com/OHDSI/ROhdsiWebApi/actions?query=workflow%3AR-CMD-check) | [![codecov.io](https://codecov.io/github/OHDSI/ROhdsiWebApi/coverage.svg?branch=main)](https://codecov.io/github/OHDSI/ROhdsiWebApi?branch=main) |
 | [SelfControlledCaseSeries](https://github.com/OHDSI/SelfControlledCaseSeries) | [![Version](https://img.shields.io/github/r-package/v/ohdsi/SelfControlledCaseSeries?label=%20)](https://ohdsi.github.io/SelfControlledCaseSeries/) | Martijn Schuemie  | GitHub | [![Open issues](https://img.shields.io/github/issues-raw/OHDSI/SelfControlledCaseSeries?label=%20)](https://github.com/OHDSI/SelfControlledCaseSeries/issues) | [![Open pull-requests](https://img.shields.io/github/issues-pr-raw/OHDSI/SelfControlledCaseSeries?label=%20)](https://github.com/OHDSI/SelfControlledCaseSeries/pulls) | [![Build Status](https://github.com/OHDSI/SelfControlledCaseSeries/workflows/R-CMD-check/badge.svg)](https://github.com/OHDSI/SelfControlledCaseSeries/actions?query=workflow%3AR-CMD-check) | [![codecov.io](https://codecov.io/github/OHDSI/SelfControlledCaseSeries/coverage.svg?branch=main)](https://codecov.io/github/OHDSI/SelfControlledCaseSeries?branch=main) |
 | [SelfControlledCohort](https://github.com/OHDSI/SelfControlledCohort) | [![Version](https://img.shields.io/github/r-package/v/ohdsi/SelfControlledCohort?label=%20)](https://ohdsi.github.io/SelfControlledCohort/) | Jamie Gilbert | GitHub | [![Open issues](https://img.shields.io/github/issues-raw/OHDSI/SelfControlledCohort?label=%20)](https://github.com/OHDSI/SelfControlledCohort/issues) | [![Open pull-requests](https://img.shields.io/github/issues-pr-raw/OHDSI/SelfControlledCohort?label=%20)](https://github.com/OHDSI/SelfControlledCohort/pulls) | [![Build Status](https://github.com/OHDSI/SelfControlledCohort/workflows/R-CMD-check/badge.svg)](https://github.com/OHDSI/SelfControlledCohort/actions?query=workflow%3AR-CMD-check) | [![codecov.io](https://codecov.io/github/OHDSI/SelfControlledCohort/coverage.svg?branch=main)](https://codecov.io/github/OHDSI/SelfControlledCohort?branch=main) |

Rmd/packages.Rmd

@@ -50,6 +50,7 @@ Below are the packages included in HADES. For each package a link is provided wi
 <li><h4><i class="fas  fa-cube "></i> <a href="https://ohdsi.github.io/OhdsiSharing">OhdsiSharing</a></h4>Securely sharing (large) files between OHDSI collaborators.</br><a href="https://ohdsi.github.io/OhdsiSharing">Learn more...</a></li>
 <li><h4><i class="fas  fa-cube "></i> <a href="https://ohdsi.github.io/OhdsiShinyModules">OhdsiShinyModules</a></h4>Contains shiny modules that can be used within shiny result interfaces</br><a href="https://ohdsi.github.io/OhdsiShinyModules">Learn more...</a></li>
 <li><h4><i class="fas  fa-cube "></i> <a href="https://ohdsi.github.io/ParallelLogger">ParallelLogger</a></h4>Support for parallel computation with logging to console, disk, or e-mail.</br><a href="https://ohdsi.github.io/ParallelLogger">Learn more...</a></li>
+<li><h4><i class="fas  fa-cube "></i> <a href="https://ohdsi.github.io/ResultModelManager">ResultModelManager</a></h4>A lightweight utility for data migrations allowing old results to work with new shiny apps and data visualisations.</br><a href="https://ohdsi.github.io/ResultModelManager">Learn more...</a></li>
 <li><h4><i class="fas  fa-cube "></i> <a href="https://ohdsi.github.io/ROhdsiWebApi">ROhdsiWebApi</a></h4>Interact with OHDSI WebAPI web services.</br><a href="https://ohdsi.github.io/ROhdsiWebApi">Learn more...</a></li>
 <li><h4><i class="fas  fa-cube "></i> <a href="https://ohdsi.github.io/SqlRender">SqlRender</a></h4>Generate SQL on the fly for the various SQL dialects.</br><a href="https://ohdsi.github.io/SqlRender">Learn more...</a></li>
 </ul>

Rmd/support.Rmd

@@ -64,6 +64,8 @@ Bug reports should be files using the issue tracker of the misbehaving package:
 
 - [PheValuator issue tracker](https://github.com/OHDSI/PheValuator/issues)
 
+- [ResultModelManager issue tracker](https://github.com/OHDSI/ResultModelManager/issues)
+
 - [ROhdsiWebApi issue tracker](https://github.com/OHDSI/ROhdsiWebApi/issues)
 
 - [SelfControlledCaseSeries issue tracker](https://github.com/OHDSI/SelfControlledCaseSeries/issues)

docs/developmentRoadmap.html

@@ -495,6 +495,8 @@ <h1>Package milestones</h1>
 <script>addMileStones('PhenotypeLibrary')</script>
 <p id='PheValuator'/>
 <script>addMileStones('PheValuator')</script>
+<p id='ResultModelManager'/>
+<script>addMileStones('ResultModelManager')</script>
 <p id='ROhdsiWebApi'/>
 <script>addMileStones('ROhdsiWebApi')</script>
 <p id='SelfControlledCaseSeries'/>

docs/packageStatuses.html

@@ -650,6 +650,16 @@ <h1 class="title toc-ignore">Package statuses</h1>
 <td align="center"><a href="https://codecov.io/github/OHDSI/PheValuator?branch=main"><img src="https://codecov.io/github/OHDSI/PheValuator/coverage.svg?branch=main" alt="codecov.io" /></a></td>
 </tr>
 <tr class="even">
+<td align="left"><a href="https://github.com/OHDSI/ResultModelManager">ResultModelManager</a></td>
+<td align="center"><a href="https://ohdsi.github.io/ResultModelManager/"><img src="https://img.shields.io/github/r-package/v/ohdsi/ResultModelManager?label=%20" alt="Version" /></a></td>
+<td align="left">Jamie Gilbert</td>
+<td align="center">GitHub</td>
+<td align="center"><a href="https://github.com/OHDSI/ResultModelManager/issues"><img src="https://img.shields.io/github/issues-raw/OHDSI/ResultModelManager?label=%20" alt="Open issues" /></a></td>
+<td align="center"><a href="https://github.com/OHDSI/ResultModelManager/pulls"><img src="https://img.shields.io/github/issues-pr-raw/OHDSI/ResultModelManager?label=%20" alt="Open pull-requests" /></a></td>
+<td align="center"><a href="https://github.com/OHDSI/ResultModelManager/actions?query=workflow%3AR-CMD-check"><img src="https://github.com/OHDSI/ResultModelManager/workflows/R-CMD-check/badge.svg" alt="Build Status" /></a></td>
+<td align="center"><a href="https://codecov.io/github/OHDSI/ResultModelManager?branch=main"><img src="https://codecov.io/github/OHDSI/ResultModelManager/coverage.svg?branch=main" alt="codecov.io" /></a></td>
+</tr>
+<tr class="odd">
 <td align="left"><a href="https://github.com/OHDSI/ROhdsiWebApi">ROhdsiWebApi</a></td>
 <td align="center"><a href="https://ohdsi.github.io/ROhdsiWebApi/"><img src="https://img.shields.io/github/r-package/v/ohdsi/ROhdsiWebApi?label=%20" alt="Version" /></a></td>
 <td align="left">Gowtham Rao</td>
@@ -659,7 +669,7 @@ <h1 class="title toc-ignore">Package statuses</h1>
 <td align="center"><a href="https://github.com/OHDSI/ROhdsiWebApi/actions?query=workflow%3AR-CMD-check"><img src="https://github.com/OHDSI/ROhdsiWebApi/workflows/R-CMD-check/badge.svg" alt="Build Status" /></a></td>
 <td align="center"><a href="https://codecov.io/github/OHDSI/ROhdsiWebApi?branch=main"><img src="https://codecov.io/github/OHDSI/ROhdsiWebApi/coverage.svg?branch=main" alt="codecov.io" /></a></td>
 </tr>
-<tr class="odd">
+<tr class="even">
 <td align="left"><a href="https://github.com/OHDSI/SelfControlledCaseSeries">SelfControlledCaseSeries</a></td>
 <td align="center"><a href="https://ohdsi.github.io/SelfControlledCaseSeries/"><img src="https://img.shields.io/github/r-package/v/ohdsi/SelfControlledCaseSeries?label=%20" alt="Version" /></a></td>
 <td align="left">Martijn Schuemie</td>
@@ -669,7 +679,7 @@ <h1 class="title toc-ignore">Package statuses</h1>
 <td align="center"><a href="https://github.com/OHDSI/SelfControlledCaseSeries/actions?query=workflow%3AR-CMD-check"><img src="https://github.com/OHDSI/SelfControlledCaseSeries/workflows/R-CMD-check/badge.svg" alt="Build Status" /></a></td>
 <td align="center"><a href="https://codecov.io/github/OHDSI/SelfControlledCaseSeries?branch=main"><img src="https://codecov.io/github/OHDSI/SelfControlledCaseSeries/coverage.svg?branch=main" alt="codecov.io" /></a></td>
 </tr>
-<tr class="even">
+<tr class="odd">
 <td align="left"><a href="https://github.com/OHDSI/SelfControlledCohort">SelfControlledCohort</a></td>
 <td align="center"><a href="https://ohdsi.github.io/SelfControlledCohort/"><img src="https://img.shields.io/github/r-package/v/ohdsi/SelfControlledCohort?label=%20" alt="Version" /></a></td>
 <td align="left">Jamie Gilbert</td>
@@ -679,7 +689,7 @@ <h1 class="title toc-ignore">Package statuses</h1>
 <td align="center"><a href="https://github.com/OHDSI/SelfControlledCohort/actions?query=workflow%3AR-CMD-check"><img src="https://github.com/OHDSI/SelfControlledCohort/workflows/R-CMD-check/badge.svg" alt="Build Status" /></a></td>
 <td align="center"><a href="https://codecov.io/github/OHDSI/SelfControlledCohort?branch=main"><img src="https://codecov.io/github/OHDSI/SelfControlledCohort/coverage.svg?branch=main" alt="codecov.io" /></a></td>
 </tr>
-<tr class="odd">
+<tr class="even">
 <td align="left"><a href="https://github.com/OHDSI/SqlRender">SqlRender</a></td>
 <td align="center"><a href="https://ohdsi.github.io/SqlRender/"><img src="https://img.shields.io/github/r-package/v/ohdsi/SqlRender?label=%20" alt="Version" /></a></td>
 <td align="left">Martijn Schuemie</td>

docs/packages.html

@@ -631,6 +631,12 @@ <h4>
 </li>
 <li>
 <h4>
+<i class="fas  fa-cube "></i> <a href="https://ohdsi.github.io/ResultModelManager">ResultModelManager</a>
+</h4>
+A lightweight utility for data migrations allowing old results to work with new shiny apps and data visualisations.</br><a href="https://ohdsi.github.io/ResultModelManager">Learn more…</a>
+</li>
+<li>
+<h4>
 <i class="fas  fa-cube "></i> <a href="https://ohdsi.github.io/ROhdsiWebApi">ROhdsiWebApi</a>
 </h4>
 Interact with OHDSI WebAPI web services.</br><a href="https://ohdsi.github.io/ROhdsiWebApi">Learn more…</a>

docs/support.html

@@ -474,6 +474,7 @@ <h1>Bug reports</h1>
 <li><p><a href="https://github.com/OHDSI/PatientLevelPrediction/issues">PatientLevelPrediction issue tracker</a></p></li>
 <li><p><a href="https://github.com/OHDSI/PhenotypeLibrary/issues">PhenotypeLibrary issue tracker</a></p></li>
 <li><p><a href="https://github.com/OHDSI/PheValuator/issues">PheValuator issue tracker</a></p></li>
+<li><p><a href="https://github.com/OHDSI/ResultModelManager/issues">ResultModelManager issue tracker</a></p></li>
 <li><p><a href="https://github.com/OHDSI/ROhdsiWebApi/issues">ROhdsiWebApi issue tracker</a></p></li>
 <li><p><a href="https://github.com/OHDSI/SelfControlledCaseSeries/issues">SelfControlledCaseSeries issue tracker</a></p></li>
 <li><p><a href="https://github.com/OHDSI/SelfControlledCohort/issues">SelfControlledCohort issue tracker</a></p></li>

extras/packages.csv

@@ -26,5 +26,6 @@ order,name,section,description,inCran,pages,maintainers,CRON
 24,OhdsiSharing,Supporting packages,Securely sharing (large) files between OHDSI collaborators.,FALSE,TRUE,Lee Evans,0 8 * * 0
 25,OhdsiShinyModules,Supporting packages,Contains shiny modules that can be used within shiny result interfaces,FALSE,TRUE,Jenna Reps,0 9 * * 0
 25,ParallelLogger,Supporting packages,"Support for parallel computation with logging to console, disk, or e-mail.",TRUE,TRUE,Martijn Schuemie ,0 10 * * 0
-26,ROhdsiWebApi,Supporting packages,Interact with OHDSI WebAPI web services.,FALSE,TRUE,Gowtham Rao,0 11 * * 0
-27,SqlRender,Supporting packages,Generate SQL on the fly for the various SQL dialects.,TRUE,TRUE,Martijn Schuemie ,0 12 * * 0
+26,ResultModelManager,Supporting packages,"A lightweight utility for data migrations allowing old results to work with new shiny apps and data visualisations.",FALSE,TRUE,Jamie Gilbert,0 13 * * 0
+27,ROhdsiWebApi,Supporting packages,Interact with OHDSI WebAPI web services.,FALSE,TRUE,Gowtham Rao,0 11 * * 0
+28,SqlRender,Supporting packages,Generate SQL on the fly for the various SQL dialects.,TRUE,TRUE,Martijn Schuemie ,0 12 * * 0