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generateMatchedCohortSet() vignette and generateMatchedCohortSet() update #30

generateMatchedCohortSet() vignette and generateMatchedCohortSet() update

generateMatchedCohortSet() vignette and generateMatchedCohortSet() update #30

Triggered via pull request January 12, 2024 17:10
Status Failure
Total duration 2m 50s
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R-CMD-check.yaml

on: pull_request
Matrix: R-CMD-check
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5 errors and 4 warnings
ubuntu-latest (release)
--- re-building ‘a01_building_concept_cohorts.Rmd’ using rmarkdown
ubuntu-latest (release)
processing vignette 'a03_age_sex_matching.Rmd' failed with diagnostics:
ubuntu-latest (release)
Vignette re-building failed.
ubuntu-latest (release)
Build process failed
ubuntu-latest (release)
Process completed with exit code 1.
ubuntu-latest (release)
Database is garbage-collected, use dbDisconnect(con, shutdown=TRUE) or duckdb::duckdb_shutdown(drv) to avoid this.
ubuntu-latest (release)
Database is garbage-collected, use dbDisconnect(con, shutdown=TRUE) or duckdb::duckdb_shutdown(drv) to avoid this.
ubuntu-latest (release)
The vignette title specified in \VignetteIndexEntry{} is different from the title in the YAML metadata. The former is "a02_applying_cohort_restrictions", and the latter is "Applying cohort restrictions". If that is intentional, you may set options(rmarkdown.html_vignette.check_title = FALSE) to suppress this check.
ubuntu-latest (release)
No files were found with the provided path: /home/runner/work/CohortConstructor/CohortConstructor/check. No artifacts will be uploaded.