Merge pull request #25 from OHDSI/develop

Develop
OHDSI · Mar 16, 2023 · 1e04d26 · 1e04d26
2 parents 0a93906 + e3c86cd
commit 1e04d26
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Showing 41 changed files with 67 additions and 50 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: Characterization
 Type: Package
 Title: Characterizations of Cohorts
-Version: 0.1.0
+Version: 0.1.1
 Date: 2023-03-13
 Authors@R: c(
 	person("Jenna", "Reps", , "[email protected]", role = c("aut", "cre")),

diff --git a/NEWS.md b/NEWS.md
@@ -1,3 +1,8 @@
+Characterization 0.1.1
+======================
+
+Fixing bug where cohort_counts were not being saved in the database 
+
 Characterization 0.1.0
 ======================
 

diff --git a/R/RunCharacterization.R b/R/RunCharacterization.R
@@ -364,6 +364,14 @@ runCharacterizationAnalyses <- function(
           tablePrefix = tablePrefix
         )
 
+        insertAndromedaToDatabase(
+          connection = conn,
+          databaseSchema = "main",
+          tableName = "cohort_counts",
+          andromedaObject = result$cohortCounts,
+          tablePrefix = tablePrefix
+        )
+
         insertAndromedaToDatabase(
           connection = conn,
           databaseSchema = "main",

diff --git a/docs/404.html b/docs/404.html
diff --git a/docs/articles/InstallationGuide.html b/docs/articles/InstallationGuide.html
diff --git a/docs/articles/UsingCharacterizationPackage.html b/docs/articles/UsingCharacterizationPackage.html
diff --git a/docs/articles/index.html b/docs/articles/index.html
diff --git a/docs/authors.html b/docs/authors.html
diff --git a/docs/index.html b/docs/index.html
diff --git a/docs/news/index.html b/docs/news/index.html
diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml
@@ -4,5 +4,5 @@ pkgdown_sha: ~
 articles:
   InstallationGuide: InstallationGuide.html
   UsingCharacterizationPackage: UsingCharacterizationPackage.html
-last_built: 2023-03-15T16:42Z
+last_built: 2023-03-16T00:54Z
 
diff --git a/docs/pull_request_template.html b/docs/pull_request_template.html
diff --git a/docs/reference/Characterization-package.html b/docs/reference/Characterization-package.html
diff --git a/docs/reference/computeAggregateCovariateAnalyses.html b/docs/reference/computeAggregateCovariateAnalyses.html
diff --git a/docs/reference/computeDechallengeRechallengeAnalyses.html b/docs/reference/computeDechallengeRechallengeAnalyses.html
diff --git a/docs/reference/computeRechallengeFailCaseSeriesAnalyses.html b/docs/reference/computeRechallengeFailCaseSeriesAnalyses.html
diff --git a/docs/reference/computeTimeToEventAnalyses.html b/docs/reference/computeTimeToEventAnalyses.html
diff --git a/docs/reference/createAggregateCovariateSettings.html b/docs/reference/createAggregateCovariateSettings.html
diff --git a/docs/reference/createCharacterizationSettings.html b/docs/reference/createCharacterizationSettings.html
diff --git a/docs/reference/createCharacterizationTables.html b/docs/reference/createCharacterizationTables.html
diff --git a/docs/reference/createDechallengeRechallengeSettings.html b/docs/reference/createDechallengeRechallengeSettings.html
diff --git a/docs/reference/createSqliteDatabase.html b/docs/reference/createSqliteDatabase.html
diff --git a/docs/reference/createTimeToEventSettings.html b/docs/reference/createTimeToEventSettings.html
diff --git a/docs/reference/exportAggregateCovariateToCsv.html b/docs/reference/exportAggregateCovariateToCsv.html
diff --git a/docs/reference/exportDatabaseToCsv.html b/docs/reference/exportDatabaseToCsv.html
diff --git a/docs/reference/exportDechallengeRechallengeToCsv.html b/docs/reference/exportDechallengeRechallengeToCsv.html
diff --git a/docs/reference/exportRechallengeFailCaseSeriesToCsv.html b/docs/reference/exportRechallengeFailCaseSeriesToCsv.html
diff --git a/docs/reference/exportTimeToEventToCsv.html b/docs/reference/exportTimeToEventToCsv.html
diff --git a/docs/reference/index.html b/docs/reference/index.html
diff --git a/docs/reference/loadAggregateCovariateAnalyses.html b/docs/reference/loadAggregateCovariateAnalyses.html
diff --git a/docs/reference/loadCharacterizationSettings.html b/docs/reference/loadCharacterizationSettings.html
diff --git a/docs/reference/loadDechallengeRechallengeAnalyses.html b/docs/reference/loadDechallengeRechallengeAnalyses.html
diff --git a/docs/reference/loadRechallengeFailCaseSeriesAnalyses.html b/docs/reference/loadRechallengeFailCaseSeriesAnalyses.html