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feat: Method structs #671

feat: Method structs

feat: Method structs #671

Triggered via pull request November 3, 2024 19:58
@oameyeoameye
synchronize #298
methods
Status Success
Total duration 13m 1s
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10 warnings
Documentation: ../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
failed to run `@example` block in src/tutorials/time_dependent.md:67-71 ```@example time_dependent varied = ω => range(0.9, 1.1, 100) result = get_steady_states(harmonic_eq, varied, fixed) plot(result, "sqrt(u1^2 + v1^2)") ``` exception = ArgumentError: Some input parameters are missing or appear more than once! Stacktrace: [1] _prepare_input_params(prob::HarmonicBalance.Problem, sweeps::OrderedCollections.OrderedDict{Num, Vector{Union{Float64, ComplexF64}}}, fixed_parameters::OrderedCollections.OrderedDict{Num, Float64}) @ HarmonicBalance ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/solve_homotopy.jl:173 [2] get_steady_states(prob::HarmonicBalance.Problem, method::WarmUp, swept_parameters::OrderedCollections.OrderedDict{Num, Vector{Union{Float64, ComplexF64}}}, fixed_parameters::OrderedCollections.OrderedDict{Num, Float64}; show_progress::Bool, sorting::String, classify_default::Bool) @ HarmonicBalance ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/solve_homotopy.jl:73 [3] get_steady_states @ ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/solve_homotopy.jl:57 [inlined] [4] #get_steady_states#51 @ ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/solve_homotopy.jl:95 [inlined] [5] get_steady_states @ ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/solve_homotopy.jl:92 [inlined] [6] get_steady_states(eom::HarmonicEquation, swept::Pair{Num, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, fixed::Tuple{Pair{Num, Float64}, Pair{Num, Float64}, Pair{Num, Float64}, Pair{Num, Float64}, Pair{Num, Float64}, Pair{Num, Float64}, Pair{Num, Int64}, Pair{Num, Float64}}; kwargs::@kwargs{}) @ HarmonicBalance ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/solve_homotopy.jl:117 [7] get_steady_states(eom::HarmonicEquation, swept::Pair{Num, StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}}, fixed::Tuple{Pair{Num, Float64}, Pair{Num, Float64}, Pair{Num, Float64}, Pair{Num, Float64}, Pair{Num, Float64}, Pair{Num, Float64}, Pair{Num, Int64}, Pair{Num, Float64}}) @ HarmonicBalance ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/solve_homotopy.jl:116 [8] top-level scope @ time_dependent.md:69 [9] eval @ ./boot.jl:430 [inlined] [10] #60 @ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined] [11] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [12] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753 [13] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170 [14] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState) @ Base.CoreLogging ./logging/logging.jl:522 [15] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger) @ Base.CoreLogging ./logging/logging.jl:632 [16] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any}) @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167 [17] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
Documentation: ../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
111 docstrings not included in the manual: HarmonicBalance.ExprUtils.count_derivatives :: Tuple{SymbolicUtils.BasicSymbolic} HarmonicBalance.to_lab_frame :: Tuple{OrderedCollections.OrderedDict, HarmonicBalance.Result, Num, Any} HarmonicBalance.is_Hopf_unstable :: Tuple{OrderedCollections.OrderedDict{Num, ComplexF64}, HarmonicBalance.Result} HarmonicBalance.plot_1D_solutions_branch :: Tuple{Int64, HarmonicBalance.Result} HarmonicBalance.ExprUtils._fourier_term :: NTuple{4, Any} HarmonicBalance.ExprUtils.expand_all :: Tuple{Any} HarmonicBalance.sort_1D :: Tuple{Vector{Vector{Vector{ComplexF64}}}} HarmonicBalance._prepare_input_params :: Tuple{HarmonicBalance.Problem, OrderedCollections.OrderedDict{Num, Vector{Union{Float64, ComplexF64}}}, OrderedCollections.OrderedDict{Num, Float64}} HarmonicBalance.LinearResponse._pair_to_peaks :: Tuple{Any, Vector} HarmonicBalance.alg_specific_options :: Tuple{Polyhedral} HarmonicBalance.alg_specific_options :: Tuple{TotalDegree} HarmonicBalance.alg_specific_options :: Tuple{WarmUp} HarmonicBalance.HC_wrapper.declare_variable :: Tuple{String} HarmonicBalance.classify_branch :: Tuple{HarmonicBalance.Result, Int64, String} HarmonicBalance.is_repetitive :: Tuple{Any} HarmonicBalance.FFTWExt.FFT :: Tuple{Any, Any} HarmonicBalance.LinearResponse._simplify_spectrum :: Tuple{HarmonicBalance.LinearResponse.JacobianSpectrum} HarmonicBalance.ExprUtils.is_function :: Tuple{Any, Any} HarmonicBalance.filter_result! :: Tuple{HarmonicBalance.Result, String} HarmonicBalance._get_mask :: Union{Tuple{Any, Any}, Tuple{Any, Any, Any}} HarmonicBalance.rearrange! :: Tuple{HarmonicEquation, Vector{Num}} HarmonicBalance.LinearResponse.get_implicit_Jacobian :: Tuple{HarmonicEquation} HarmonicBalance.newton :: Tuple{HarmonicBalance.Result, OrderedCollections.OrderedDict} Base.show :: Tuple{IO, TotalDegree} Base.show :: Tuple{IO, Polyhedral} Base.show :: Tuple{IO, WarmUp} HarmonicBalance.filter_duplicate_parameters :: Tuple{Any, Any} HarmonicBalance.LimitCycles._cycle_Problem :: Tuple{HarmonicEquation, Num} HarmonicBalance.LinearResponse._simplify_spectra! :: Tuple{Dict{Num, HarmonicBalance.LinearResponse.JacobianSpectrum}} HarmonicBalance.LimitCycles.get_limit_cycles :: Tuple{HarmonicEquation, Any, Any, Any} HarmonicBalance.ExprUtils.is_trig :: Tuple{Num} HarmonicBalance._parameters :: Tuple{HarmonicEquation} HarmonicBalance.ExprUtils.isexp :: Tuple{Any} HarmonicBalance.LimitCycles.add_pairs! :: Tuple{DifferentialEquation} HarmonicBalance.classify_binaries! :: Tuple{HarmonicBalance.Result} HarmonicBalance.thread :: Tuple{HarmonicBalance.HarmonicBalanceMethod} HarmonicBalance.LimitCycles.get_cycle_variables :: Tuple{HarmonicEquation, Num} HarmonicBalance.method_symbol :: Tuple{Polyhedral} HarmonicBalance.method_symbol :: Tuple{TotalDegree} TimeEvolution._closest_branch_index :: Tuple{HarmonicBalance.Result, Vector{Float64}, Int64} HarmonicBalance.ExprUtils.fourier_sin_term :: Tuple{Any, Any, Any} HarmonicBalance.LinearResponse._get_as :: Tuple{Vector{HarmonicVariable}} HarmonicBalance.rearrange_standard :: Tuple{HarmonicEquation} HarmonicBalance.ExprUtils.add_div :: Tuple{Any} HarmonicBalance.var_name :: Tuple{Num} HarmonicBalance.remove_rows_columns :: Tuple{Matrix, Vector{Int64}, Vector{Int64}} HarmonicBalance.seed :: Tuple{HarmonicBalance.HarmonicBalanceMethod} HarmonicBalance._remove_brackets :: Tuple{HarmonicEquation} HarmonicBalance.LinearResponse._get_uv_pairs :: Tuple{Vector{HarmonicVariable}} HarmonicBalance.alg_default_options :: Tuple{HarmonicBalance.HarmonicBalanceMethod} Symbolics.get_variables :: Tuple{HarmonicEquation} HarmonicBalance.LinearResponse.evaluate :: Tuple{HarmonicBalance.LinearResponse.Lorentzian, Float64} HarmonicBalance.LinearResponse.evaluate :: Tuple{HarmonicBalance.LinearResponse.JacobianSpectrum, Float64} HarmonicBalance.show_fields :: Tuple{Any} HarmonicBalance.H
Documentation: ../../../.julia/packages/DocumenterVitepress/8qgu7/src/vitepress_config.jl#L111
DocumenterVitepress: No logo.png file found in `docs/src/assets`. Skipping logo replacement.
Documentation: ../../../.julia/packages/DocumenterVitepress/8qgu7/src/writer.jl#L702
DocumenterVitepress: un-expanded `@example time_dependent` block encountered on page src/tutorials/time_dependent.md. The first few lines of code in this node are: ``` varied = ω => range(0.9, 1.1, 100) result = get_steady_states(harmonic_eq, varied, fixed) plot(result, "sqrt(u1^2 + v1^2)") ```
Documentation: ../../../.julia/packages/DocumenterVitepress/8qgu7/src/writer.jl#L488
DocumenterVitepress: Unknown MIME type text/latex provided and no alternatives given. Ignoring render!
Documentation: ../../../.julia/packages/DocumenterVitepress/8qgu7/src/writer.jl#L488
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Documentation: ../../../.julia/packages/Documenter/C1XEF/src/deploydocs.jl#L533
removing `stable` and linking `stable` to `v0.11.1`.
Documentation: ../../../.julia/packages/Documenter/C1XEF/src/deploydocs.jl#L533
removing `v0.11` and linking `v0.11` to `v0.11.1`.
Documentation: ../../../.julia/packages/Documenter/C1XEF/src/deploydocs.jl#L533
removing `v0.10` and linking `v0.10` to `v0.10.11`.
Documentation: ../../../.julia/packages/Documenter/C1XEF/src/deploydocs.jl#L533
removing `v0.9` and linking `v0.9` to `v0.9.2`.