test: enable JET #623
Annotations
10 warnings
Run julia-actions/julia-docdeploy@v1:
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
failed to run `@example` block in src/tutorials/linear_response.md:44-46
```@example linresp
plot_linear_response(result, x, Ω_range=range(0.95, 1.05, 300), branch=1, logscale=true)
```
exception =
UndefVarError: `Symbolics` not defined in `HarmonicBalance.LinearResponse`
Suggestion: check for spelling errors or missing imports.
Hint: a global variable of this name also exists in Symbolics.
Hint: a global variable of this name also exists in ModelingToolkit.
Stacktrace:
[1] HarmonicBalance.LinearResponse.JacobianSpectrum(res::Result; index::Int64, branch::Int64, force::Bool)
@ HarmonicBalance.LinearResponse ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/Lorentzian_spectrum.jl:93
[2] JacobianSpectrum
@ ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/Lorentzian_spectrum.jl:66 [inlined]
[3] #41
@ ./none:0 [inlined]
[4] iterate(::Base.Generator{Vector{Int64}, HarmonicBalance.LinearResponse.var"#41#42"{Result, Int64}})
@ Base ./generator.jl:48
[5] collect(itr::Base.Generator{Vector{Int64}, HarmonicBalance.LinearResponse.var"#41#42"{Result, Int64}})
@ Base ./array.jl:780
[6] get_jacobian_response(res::Result, nat_var::Num, Ω_range::StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}, branch::Int64; show_progress::Bool)
@ HarmonicBalance.LinearResponse ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/plotting.jl:7
[7] get_jacobian_response
@ ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/plotting.jl:1 [inlined]
[8] plot_linear_response(res::Result, nat_var::Num; Ω_range::StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}, branch::Int64, order::Int64, logscale::Bool, show_progress::Bool, kwargs::@kwargs{})
@ HarmonicBalance.LinearResponse ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/plotting.jl:147
[9] top-level scope
@ linear_response.md:45
[10] eval
@ ./boot.jl:430 [inlined]
[11] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[12] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[13] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[14] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[15] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState)
@ Base.CoreLogging ./logging/logging.jl:522
[16] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger)
@ Base.CoreLogging ./logging/logging.jl:632
[17] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[18] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
Run julia-actions/julia-docdeploy@v1:
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
failed to run `@example` block in src/tutorials/linear_response.md:74-80
```@example linresp
plot(
plot_linear_response(result, x, branch=1, Ω_range=range(0.95,1.1,300), logscale=true),
plot_linear_response(result, x, branch=2, Ω_range=range(0.9,1.1,300), logscale=true),
size=(600, 250), margin=3mm
)
```
exception =
UndefVarError: `Symbolics` not defined in `HarmonicBalance.LinearResponse`
Suggestion: check for spelling errors or missing imports.
Hint: a global variable of this name also exists in Symbolics.
Hint: a global variable of this name also exists in ModelingToolkit.
Stacktrace:
[1] HarmonicBalance.LinearResponse.JacobianSpectrum(res::Result; index::Int64, branch::Int64, force::Bool)
@ HarmonicBalance.LinearResponse ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/Lorentzian_spectrum.jl:93
[2] JacobianSpectrum
@ ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/Lorentzian_spectrum.jl:66 [inlined]
[3] #41
@ ./none:0 [inlined]
[4] iterate(::Base.Generator{Vector{Int64}, HarmonicBalance.LinearResponse.var"#41#42"{Result, Int64}})
@ Base ./generator.jl:48
[5] collect(itr::Base.Generator{Vector{Int64}, HarmonicBalance.LinearResponse.var"#41#42"{Result, Int64}})
@ Base ./array.jl:780
[6] get_jacobian_response(res::Result, nat_var::Num, Ω_range::StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}, branch::Int64; show_progress::Bool)
@ HarmonicBalance.LinearResponse ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/plotting.jl:7
[7] get_jacobian_response
@ ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/plotting.jl:1 [inlined]
[8] plot_linear_response(res::Result, nat_var::Num; Ω_range::StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}, branch::Int64, order::Int64, logscale::Bool, show_progress::Bool, kwargs::@kwargs{})
@ HarmonicBalance.LinearResponse ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/plotting.jl:147
[9] top-level scope
@ linear_response.md:75
[10] eval
@ ./boot.jl:430 [inlined]
[11] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[12] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[13] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[14] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[15] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState)
@ Base.CoreLogging ./logging/logging.jl:522
[16] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger)
@ Base.CoreLogging ./logging/logging.jl:632
[17] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[18] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
Run julia-actions/julia-docdeploy@v1:
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
failed to run `@example` block in src/tutorials/linear_response.md:85-95
```@example linresp
fixed = (α => 1., ω0 => 1.0, γ => 1e-2, ω => 1) # fixed parameters
swept = F => 10 .^ range(-6, -1, 200) # range of parameter values
result = get_steady_states(harmonic_eq, swept, fixed)
plot(
plot(result, "sqrt(u1^2 + v1^2)", xscale=:log),
plot_linear_response(result, x, branch=1, Ω_range=range(0.9,1.1,300), logscale=true, xscale=:log),
size=(600, 250), margin=3mm
)
```
exception =
UndefVarError: `Symbolics` not defined in `HarmonicBalance.LinearResponse`
Suggestion: check for spelling errors or missing imports.
Hint: a global variable of this name also exists in Symbolics.
Hint: a global variable of this name also exists in ModelingToolkit.
Stacktrace:
[1] HarmonicBalance.LinearResponse.JacobianSpectrum(res::Result; index::Int64, branch::Int64, force::Bool)
@ HarmonicBalance.LinearResponse ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/Lorentzian_spectrum.jl:93
[2] JacobianSpectrum
@ ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/Lorentzian_spectrum.jl:66 [inlined]
[3] #41
@ ./none:0 [inlined]
[4] iterate(::Base.Generator{Vector{Int64}, HarmonicBalance.LinearResponse.var"#41#42"{Result, Int64}})
@ Base ./generator.jl:48
[5] collect(itr::Base.Generator{Vector{Int64}, HarmonicBalance.LinearResponse.var"#41#42"{Result, Int64}})
@ Base ./array.jl:780
[6] get_jacobian_response(res::Result, nat_var::Num, Ω_range::StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}, branch::Int64; show_progress::Bool)
@ HarmonicBalance.LinearResponse ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/plotting.jl:7
[7] get_jacobian_response
@ ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/plotting.jl:1 [inlined]
[8] plot_linear_response(res::Result, nat_var::Num; Ω_range::StepRangeLen{Float64, Base.TwicePrecision{Float64}, Base.TwicePrecision{Float64}, Int64}, branch::Int64, order::Int64, logscale::Bool, show_progress::Bool, kwargs::@kwargs{xscale::Symbol})
@ HarmonicBalance.LinearResponse ~/work/HarmonicBalance.jl/HarmonicBalance.jl/src/LinearResponse/plotting.jl:147
[9] top-level scope
@ linear_response.md:90
[10] eval
@ ./boot.jl:430 [inlined]
[11] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[12] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[13] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[14] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[15] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState)
@ Base.CoreLogging ./logging/logging.jl:522
[16] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger)
@ Base.CoreLogging ./logging/logging.jl:632
[17] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[18] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
Run julia-actions/julia-docdeploy@v1:
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
95 docstrings not included in the manual:
RecipesBase.plot! :: Tuple{Result, Vararg{Any}}
HarmonicBalance.LimitCycles.get_limit_cycles :: Tuple{HarmonicEquation, Any, Any, Any}
HarmonicBalance.ExprUtils.expand_exp_power :: Tuple{SymbolicUtils.BasicSymbolic}
HarmonicBalance.LinearResponse.evaluate :: Tuple{HarmonicBalance.LinearResponse.JacobianSpectrum, Float64}
HarmonicBalance.LinearResponse.evaluate :: Tuple{HarmonicBalance.LinearResponse.Lorentzian, Float64}
HarmonicBalance.ExprUtils.is_trig :: Tuple{Num}
HarmonicBalance.show_fields :: Tuple{Any}
HarmonicBalance._apply_mask :: Tuple{Array{Vector{ComplexF64}}, Any}
HarmonicBalance._compile_Jacobian :: Tuple{Problem, OrderedCollections.OrderedDict{Num, Vector{Union{Float64, ComplexF64}}}, OrderedCollections.OrderedDict{Num, Float64}}
HarmonicBalance.ExprUtils.max_power :: Tuple{Num, Num}
HarmonicBalance.ExprUtils.get_all_terms :: Tuple{Num}
HarmonicBalance._parameters :: Tuple{HarmonicEquation}
HarmonicBalance.to_lab_frame :: Tuple{Result, Any}
HarmonicBalance.is_Hopf_unstable :: Tuple{OrderedCollections.OrderedDict{Num, ComplexF64}, Result}
HarmonicBalance.HC_wrapper.parse_equations :: Tuple{Vector{Num}}
HarmonicBalance.plot_1D_solutions_branch :: Tuple{Int64, Result}
HarmonicBalance.ExprUtils._fourier_term :: NTuple{4, Any}
HarmonicBalance.LimitCycles.add_pairs! :: Tuple{DifferentialEquation}
HarmonicBalance.follow_branch :: Tuple{Int64, Result}
HarmonicBalance.ExprUtils.isexp :: Tuple{Any}
HarmonicBalance.to_lab_frame_velocity :: Tuple{Result, Any}
HarmonicBalance.get_independent_variables :: Tuple{HarmonicEquation}
HarmonicBalance.compile_matrix :: Tuple{Any, Any}
HarmonicBalance.classify_binaries! :: Tuple{Result}
HarmonicBalance.LimitCycles.get_cycle_variables :: Tuple{HarmonicEquation, Num}
HarmonicBalance.ExprUtils.expand_all :: Tuple{Any}
HarmonicBalance.sort_1D :: Tuple{Vector{Vector{Vector{ComplexF64}}}}
HarmonicBalance._solve_warmup :: Tuple{Problem, Any, Any}
TimeEvolution._closest_branch_index :: Tuple{Result, Vector{Float64}, Int64}
HarmonicBalance.ExprUtils.simplify_exp_products :: Tuple{SymbolicUtils.BasicSymbolic}
HarmonicBalance.ExprUtils.subtype
HarmonicBalance._prepare_input_params :: Tuple{Problem, OrderedCollections.OrderedDict{Num, Vector{Union{Float64, ComplexF64}}}, OrderedCollections.OrderedDict{Num, Float64}}
HarmonicBalance._reorder_nested :: Tuple{Array, Vector{Int64}}
HomotopyContinuation.ModelKit.Variable :: Tuple{Num}
HarmonicBalance.ExprUtils.trig_reduce :: Tuple{Any}
HarmonicBalance.is_physical :: Tuple{OrderedCollections.OrderedDict{Num, ComplexF64}, Result}
HarmonicBalance.ExprUtils.fourier_sin_term :: Tuple{Any, Any, Any}
HarmonicBalance.LinearResponse._pair_to_peaks :: Tuple{Any, Vector}
HarmonicBalance.LinearResponse._get_as :: Tuple{Vector{HarmonicVariable}}
HarmonicBalance.get_distance_matrix :: Tuple{Vector{Vector{Vector{ComplexF64}}}, Vector{Vector{ComplexF64}}}
HarmonicBalance.get_distance_matrix :: Tuple{Vector{Vector{ComplexF64}}, Vector{Vector{ComplexF64}}}
HarmonicBalance._get_raw_solution :: Tuple{Problem, Any}
HarmonicBalance.rearrange_standard :: Tuple{HarmonicEquation}
HarmonicBalance.ExprUtils.power_of :: Tuple{Num, Num}
HarmonicBalance.HC_wrapper.declare_variable :: Tuple{String}
HarmonicBalance.classify_branch :: Tuple{Result, Int64, String}
HarmonicBalance.LinearResponse.plot_rotframe_jacobian_response :: Tuple{Result}
HarmonicBalance.is_repetitive :: Tuple{Any}
HarmonicBalance.LinearResponse.evaluate_response_matrix :: Tuple{HarmonicBalance.LinearResponse.ResponseMatrix, OrderedCollections.OrderedDict{Num, ComplexF64}, Any}
HarmonicBalance.LinearResponse._simplify_spectrum :: Tuple{HarmonicBalance.LinearResponse.JacobianSpectrum}
HarmonicBalance._parse_symbol_names :: Tuple{Problem}
HarmonicBalance.var_name :: Tuple{Num}
HarmonicBalance.remove_rows_columns :: Tuple{Matrix, Vector{Int64}, Vector{Int64}}
|
Run julia-actions/julia-docdeploy@v1:
../../../.julia/packages/DocumenterVitepress/8qgu7/src/vitepress_config.jl#L111
DocumenterVitepress: No logo.png file found in `docs/src/assets`. Skipping logo replacement.
|
Run julia-actions/julia-docdeploy@v1:
../../../.julia/packages/DocumenterVitepress/8qgu7/src/writer.jl#L488
DocumenterVitepress: Unknown MIME type text/latex provided and no alternatives given. Ignoring render!
|
Run julia-actions/julia-docdeploy@v1:
../../../.julia/packages/DocumenterVitepress/8qgu7/src/writer.jl#L488
DocumenterVitepress: Unknown MIME type text/latex provided and no alternatives given. Ignoring render!
|
Run julia-actions/julia-docdeploy@v1:
../../../.julia/packages/DocumenterVitepress/8qgu7/src/writer.jl#L702
DocumenterVitepress: un-expanded `@example linresp` block encountered on page src/tutorials/linear_response.md.
The first few lines of code in this node are:
```
plot_linear_response(result, x, Ω_range=range(0.95, 1.05, 300), branch=1, logscale=true)
```
|
Run julia-actions/julia-docdeploy@v1:
../../../.julia/packages/DocumenterVitepress/8qgu7/src/writer.jl#L702
DocumenterVitepress: un-expanded `@example linresp` block encountered on page src/tutorials/linear_response.md.
The first few lines of code in this node are:
```
plot(
plot_linear_response(result, x, branch=1, Ω_range=range(0.95,1.1,300), logscale=true),
plot_linear_response(result, x, branch=2, Ω_range=range(0.9,1.1,300), logscale=true),
size=(600, 250), margin=3mm
)
```
|
Run julia-actions/julia-docdeploy@v1:
../../../.julia/packages/DocumenterVitepress/8qgu7/src/writer.jl#L702
DocumenterVitepress: un-expanded `@example linresp` block encountered on page src/tutorials/linear_response.md.
The first few lines of code in this node are:
```
fixed = (α => 1., ω0 => 1.0, γ => 1e-2, ω => 1) # fixed parameters
swept = F => 10 .^ range(-6, -1, 200) # range of parameter values
result = get_steady_states(harmonic_eq, swept, fixed)
plot(
plot(result, "sqrt(u1^2 + v1^2)", xscale=:log),
```
|
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