Add SAMtools-0.1.19-GCC-10.3.0.eb

[Neves-P]

No description provided.

[neves-p-bot]

Instance neves-habrok-bot is configured to build for:

• architectures: x86_64/generic, x86_64/amd/zen3, x86_64/intel/skylake_avx512, x86_64/intel/icelake
• repositories: hpc.rug.nl-2023.01

[Neves-P]

bot: build repo:hpc.rug.nl arch:x86_64/amd/zen3
bot: build repo:hpc.rug.nl arch:x86_64/intel/icelake
bot: build repo:hpc.rug.nl arch:x86_64/intel/skylake_avx512

[neves-p-bot]

Updates by the bot instance neves-habrok-bot (click for details)

• received bot command build repo:hpc.rug.nl arch:x86_64/amd/zen3 from Neves-P

  • expanded format: build repository:hpc.rug.nl architecture:x86_64/amd/zen3

• received bot command build repo:hpc.rug.nl arch:x86_64/intel/icelake from Neves-P

  • expanded format: build repository:hpc.rug.nl architecture:x86_64/intel/icelake

• received bot command build repo:hpc.rug.nl arch:x86_64/intel/skylake_avx512 from Neves-P

  • expanded format: build repository:hpc.rug.nl architecture:x86_64/intel/skylake_avx512

• handling command build repository:hpc.rug.nl architecture:x86_64/amd/zen3 resulted in:

  • submitted job 11316639, for details & status see Add SAMtools-0.1.19-GCC-10.3.0.eb #46 (comment)

• handling command build repository:hpc.rug.nl architecture:x86_64/intel/icelake resulted in:

  • submitted job 11316641, for details & status see Add SAMtools-0.1.19-GCC-10.3.0.eb #46 (comment)

• handling command build repository:hpc.rug.nl architecture:x86_64/intel/skylake_avx512 resulted in:

  • submitted job 11316642, for details & status see Add SAMtools-0.1.19-GCC-10.3.0.eb #46 (comment)

[neves-p-bot]

New job on instance neves-habrok-bot for architecture x86_64-amd-zen3 for repository hpc.rug.nl-2023.01 in job dir /home1/f115372/jobs/2024.07/pr_46/11316639

date	job status	comment
Jul 09 08:48:06 UTC 2024	submitted	job id 11316639 awaits release by job manager
Jul 09 08:48:45 UTC 2024	released	job awaits launch by Slurm scheduler
Jul 09 08:50:01 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file slurm-11316639.out ✅ no message matching ERROR: ✅ no message matching FAILED: ✅ no message matching required modules missing: ✅ found message(s) saying number of built applications (1) matches the number of build requests (1) ✅ found message matching .tar.gz created! Artefacts /scratch/public/software-tarballs/2023.01-x86_64-amd-zen3-1720514982.tar.gz size: 0 MiB (641629 bytes) entries: 66 modules under 2023.01/rocky8/x86_64/amd/zen3/modules/all SAMtools/0.1.19-GCC-10.3.0.lua software under 2023.01/rocky8/x86_64/amd/zen3/software SAMtools/0.1.19-GCC-10.3.0 other under 2023.01/rocky8/x86_64/amd/zen3 no other files in tarball
Jul 09 08:50:01 UTC 2024	test result	(no tests yet)

[neves-p-bot]

New job on instance neves-habrok-bot for architecture x86_64-intel-icelake for repository hpc.rug.nl-2023.01 in job dir /home1/f115372/jobs/2024.07/pr_46/11316641

date	job status	comment
Jul 09 08:48:11 UTC 2024	submitted	job id 11316641 awaits release by job manager
Jul 09 08:48:42 UTC 2024	released	job awaits launch by Slurm scheduler
Jul 09 08:49:59 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file slurm-11316641.out ✅ no message matching ERROR: ✅ no message matching FAILED: ✅ no message matching required modules missing: ✅ found message(s) saying number of built applications (1) matches the number of build requests (1) ✅ found message matching .tar.gz created! Artefacts /scratch/public/software-tarballs/2023.01-x86_64-intel-icelake-1720514988.tar.gz size: 0 MiB (644497 bytes) entries: 66 modules under 2023.01/rocky8/x86_64/intel/icelake/modules/all SAMtools/0.1.19-GCC-10.3.0.lua software under 2023.01/rocky8/x86_64/intel/icelake/software SAMtools/0.1.19-GCC-10.3.0 other under 2023.01/rocky8/x86_64/intel/icelake no other files in tarball
Jul 09 08:49:59 UTC 2024	test result	(no tests yet)

[neves-p-bot]

New job on instance neves-habrok-bot for architecture x86_64-intel-skylake_avx512 for repository hpc.rug.nl-2023.01 in job dir /home1/f115372/jobs/2024.07/pr_46/11316642

date	job status	comment
Jul 09 08:48:16 UTC 2024	submitted	job id 11316642 awaits release by job manager
Jul 09 08:48:39 UTC 2024	released	job awaits launch by Slurm scheduler
Jul 09 08:49:54 UTC 2024	running	job 11316642 is running
Jul 09 08:51:08 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file slurm-11316642.out ✅ no message matching ERROR: ✅ no message matching FAILED: ✅ no message matching required modules missing: ✅ found message(s) saying number of built applications (1) matches the number of build requests (1) ✅ found message matching .tar.gz created! Artefacts /scratch/public/software-tarballs/2023.01-x86_64-intel-skylake_avx512-1720515014.tar.gz size: 0 MiB (645025 bytes) entries: 66 modules under 2023.01/rocky8/x86_64/intel/skylake_avx512/modules/all SAMtools/0.1.19-GCC-10.3.0.lua software under 2023.01/rocky8/x86_64/intel/skylake_avx512/software SAMtools/0.1.19-GCC-10.3.0 other under 2023.01/rocky8/x86_64/intel/skylake_avx512 no other files in tarball
Jul 09 08:51:08 UTC 2024	test result	(no tests yet)

[Neves-P]

Created a test pr_46 test directory in /home1/f115372/jobs/2024.06 with some dummy files and directories to see if they also get moved to the trash bin when merging this PR (see #45 for previous attempt).

[f115372@interactive2 pr_46]$ pwd
/home1/f115372/jobs/2024.06/pr_46
[f115372@interactive2 pr_46]$ tree
.
├── another_dir -> event_a-test-event-1234/
├── a_test_file.txt
└── event_a-test-event-1234
    └── another_test_file.txt

2 directories, 2 files

[neves-p-bot]

PR merged! Moved ['/home1/f115372/jobs/2024.07/pr_46/11316639', '/home1/f115372/jobs/2024.07/pr_46/11316641', '/home1/f115372/jobs/2024.07/pr_46/11316642'] to /scratch/f115372/bot_shared_directory/trash_bin/Neves-Bot/software-layer/2024.07.09

[Neves-P]

Needed a child directory from /home1/f115372/jobs/2024.06/pr_46 for it to be picked up 😭 This was a bad test, doesn't replicate the actual directory structure. We'll need one more try.