Fix validation in NWB testing util classes

NeurodataWithoutBorders · Oct 21, 2023 · f23ed5c · f23ed5c
1 parent 2aceed0
commit f23ed5c
Showing 1 changed file with 12 additions and 18 deletions.
diff --git a/src/pynwb/testing/testh5io.py b/src/pynwb/testing/testh5io.py
@@ -163,18 +163,14 @@ def getContainer(self, nwbfile):
     def validate(self):
         """ Validate the created files """
         if os.path.exists(self.filename):
-            with NWBHDF5IO(self.filename, mode='r') as io:
-                errors = pynwb_validate(io)
-                if errors:
-                    for err in errors:
-                        raise Exception(err)
+            errors = pynwb_validate(paths=[self.filename])
+            if errors:
+                raise Exception("\n".join(errors))
 
         if os.path.exists(self.export_filename):
-            with NWBHDF5IO(self.filename, mode='r') as io:
-                errors = pynwb_validate(io)
-                if errors:
-                    for err in errors:
-                        raise Exception(err)
+            errors = pynwb_validate(paths=[self.export_filename])
+            if errors:
+                raise Exception("\n".join(errors))
 
 
 class AcquisitionH5IOMixin(NWBH5IOMixin):
@@ -366,13 +362,11 @@ def roundtripExportContainer(self, cache_spec=False):
     def validate(self):
         """Validate the created files."""
         if os.path.exists(self.filename):
-            with NWBHDF5IO(self.filename, mode='r') as io:
-                errors = pynwb_validate(io)
-                if errors:
-                    raise Exception("\n".join(errors))
+            errors = pynwb_validate(paths=[self.filename])
+            if errors:
+                raise Exception("\n".join(errors))
 
         if os.path.exists(self.export_filename):
-            with NWBHDF5IO(self.filename, mode='r') as io:
-                errors = pynwb_validate(io)
-                if errors:
-                    raise Exception("\n".join(errors))
+            errors = pynwb_validate(paths=[self.export_filename])
+            if errors:
+                raise Exception("\n".join(errors))