Run DANDI read tests #140
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name: Run DANDI read tests | |
on: | |
schedule: | |
- cron: '0 6 * * *' # once per day at 1am ET | |
workflow_dispatch: | |
jobs: | |
run-tests: | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
shell: bash -l {0} # necessary for conda | |
steps: | |
- name: Cancel non-latest runs | |
uses: styfle/[email protected] | |
with: | |
all_but_latest: true | |
access_token: ${{ github.token }} | |
- uses: actions/checkout@v3 | |
with: | |
submodules: 'recursive' | |
fetch-depth: 0 # tags are required for versioneer to determine the version | |
- name: Set up Conda | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
auto-update-conda: true | |
activate-environment: ros3 | |
environment-file: environment-ros3.yml | |
python-version: "3.11" | |
channels: conda-forge | |
auto-activate-base: false | |
- name: Install run dependencies | |
run: | | |
python -m pip install dandi pytest | |
python -m pip uninstall -y pynwb # uninstall pynwb | |
python -m pip install -e . | |
python -m pip list | |
- name: Conda reporting | |
run: | | |
conda info | |
conda config --show-sources | |
conda list --show-channel-urls | |
- name: Run DANDI read tests | |
run: | | |
python tests/read_dandi/test_read_dandi.py |