Merge branch 'dev' into purge_ros3_retry

.github/workflows/dailies.yml

@@ -16,13 +16,13 @@ jobs:
     uses: neurodatawithoutborders/nwbinspector/.github/workflows/doc-link-checks.yml@dev
 
   test-dandi-latest:
-    uses: neurodatawithoutborders/nwbinspector/.github/workflows/dandi_release.yml@dev
+    uses: neurodatawithoutborders/nwbinspector/.github/workflows/dandi-release.yml@dev
 
   test-dandi-dev:
-    uses: neurodatawithoutborders/nwbinspector/.github/workflows/dandi_dev.yml@dev
+    uses: neurodatawithoutborders/nwbinspector/.github/workflows/dandi-dev.yml@dev
 
   test-dandi-dev-live:
-    uses: neurodatawithoutborders/nwbinspector/.github/workflows/dandi_dev_live_service.yml@dev
+    uses: neurodatawithoutborders/nwbinspector/.github/workflows/dandi-dev-live-services.yml@dev
 
   notify:
     runs-on: ubuntu-latest

.github/workflows/dandi-dev-live-services.yml

@@ -0,0 +1,32 @@
+name: Test against DANDI dev branch - all tests, including live services
+on: workflow_call
+
+jobs:
+  build-and-test:
+    name: Testing against current DANDI release and dev branch
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+
+    steps:
+      - name: Checkout local branch of source repository
+        uses: actions/checkout@v4
+      - run: git fetch --prune --unshallow --tags
+
+      - name: Setup Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.12"
+
+      - name: Test against DANDI dev
+        run: |
+          pip install virtualenv
+          virtualenv --system-site-packages --python=python3 venvs/dandi_dev_tests
+          source venvs/dandi_dev_tests/bin/activate
+          pip install -e .[dandi]
+          cd ..
+          git clone https://github.com/dandi/dandi-cli
+          cd dandi-cli
+          pip install -e .[test]
+          pip install hdmf==3.14.3  # temporary: https://github.com/dandi/dandi-cli/issues/1494
+          pytest -vv

.github/workflows/dandi-dev.yml

@@ -0,0 +1,35 @@
+name: Test against DANDI dev branch - no network
+on: workflow_call
+
+env:
+  DANDI_TESTS_NONETWORK: "1"
+
+jobs:
+  build-and-test:
+    name: Testing against current DANDI release and dev branch
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+
+    steps:
+      - name: Checkout local branch of source repository
+        uses: actions/checkout@v4
+      - run: git fetch --prune --unshallow --tags
+
+      - name: Setup Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.12"
+
+      - name: Test local branch of NWB Inspector against DANDI dev branch
+        run: |
+          pip install virtualenv
+          virtualenv --system-site-packages --python=python3 venvs/dandi_dev_tests
+          source venvs/dandi_dev_tests/bin/activate
+          pip install -e .[dandi]
+          cd ..
+          git clone https://github.com/dandi/dandi-cli
+          cd dandi-cli
+          pip install -e .[test]
+          pip install hdmf==3.14.3  # temporary: https://github.com/dandi/dandi-cli/issues/1494
+          pytest -rsx

.github/workflows/dandi_release.yml → .github/workflows/dandi-release.yml

@@ -1,4 +1,4 @@
-name: Test against latest DANDI release - no network
+name: Run NWB Inspector tests against latest DANDI release - no network
 on: workflow_call
 
 env:
@@ -25,7 +25,7 @@ jobs:
           - '3.11'
 
     steps:
-    - name: Set up environment
+    - name: Checkout local branch of source repository
       uses: actions/checkout@v4
       with:
         # Fetch all commits so that versioneer will return something compatible
@@ -43,7 +43,9 @@ jobs:
         pip install "dandi[extras,test]"
 
     - name: Install this branch of NWB Inspector
-      run: pip install -e .
+      run: |
+        pip install -e .
+        pip install hdmf==3.14.3  # temporary: https://github.com/dandi/dandi-cli/issues/1494
 
     - name: Run all NWB Inspector tests
-      run: python -m pytest -s -v
+      run: pytest -rsx

.github/workflows/deploy-tests.yml

@@ -3,13 +3,12 @@ name: Deploy tests
 on:
   pull_request:
 
-jobs:
-  cancel-previous-runs:
-    runs-on: ubuntu-latest
-    steps:
-      - name: Cancel Previous Runs
-        uses: styfle/[email protected]
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
 
+
+jobs:
   assess-file-changes:
     uses: catalystneuro/neuroconv/.github/workflows/assess-file-changes.yml@main
 
@@ -58,17 +57,17 @@ jobs:
   test-dandi-latest:
     needs: assess-file-changes
     if: ${{ needs.assess-file-changes.outputs.SOURCE_CHANGED == 'true' }}
-    uses: ./.github/workflows/dandi_release.yml
+    uses: ./.github/workflows/dandi-release.yml
 
   test-dandi-dev:
     needs: assess-file-changes
     if: ${{ needs.assess-file-changes.outputs.SOURCE_CHANGED == 'true' }}
-    uses: ./.github/workflows/dandi_dev.yml
+    uses: ./.github/workflows/dandi-dev.yml
 
   test-dandi-dev-live:
     needs: assess-file-changes
     if: ${{ needs.assess-file-changes.outputs.SOURCE_CHANGED == 'true' }}
-    uses: ./.github/workflows/dandi_dev_live_service.yml
+    uses: ./.github/workflows/dandi-dev-live-services.yml
 
   check-final-status:
     name: All tests passing