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Remove numpy and h5py restrictions #1150

Remove numpy and h5py restrictions

Remove numpy and h5py restrictions #1150

Triggered via pull request November 22, 2024 22:22
@rlyrly
synchronize #536
rly-patch-1
Status Failure
Total duration 14m 11s
Artifacts

deploy-tests.yml

on: pull_request
run-doc-link-checks  /  Testing External Links
45s
Matrix: run-tests / build-and-test-no-dandi
Matrix: run-tests / build-and-test
Auto-detecting CHANGELOG.md updates
0s
run-dev-gallery  /  Testing against dev PyNWB version
2m 19s
test-dandi-dev  /  Testing against current DANDI release and dev branch
1m 38s
test-dandi-dev-live  /  Testing against current DANDI release and dev branch
12m 23s
Matrix: run-read-nwbfile-tests / build-and-test
Matrix: run-streaming-tests / build-and-test-no-dandi
Matrix: run-streaming-tests / build-and-test
Matrix: test-dandi-latest / test
All tests passing
7s

Annotations

5 errors and 26 warnings
run-tests / Testing using windows-latest with 3.10
Process completed with exit code 1.
run-tests / Testing using windows-latest with 3.11
Process completed with exit code 1.
run-tests / Testing using windows-latest with 3.12
Process completed with exit code 1.
run-tests / Testing using windows-latest with 3.9
Process completed with exit code 1.
All tests passing
Process completed with exit code 1.
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
run-read-nwbfile-tests / Streaming tests using ubuntu-latest with 3.12
/usr/share/miniconda/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
run-read-nwbfile-tests / Streaming tests using ubuntu-latest with 3.12
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
run-read-nwbfile-tests / Streaming tests using ubuntu-latest with 3.11
/usr/share/miniconda/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
run-read-nwbfile-tests / Streaming tests using ubuntu-latest with 3.11
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
run-read-nwbfile-tests / Streaming tests using ubuntu-latest with 3.10
/usr/share/miniconda/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
run-read-nwbfile-tests / Streaming tests using ubuntu-latest with 3.10
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
run-read-nwbfile-tests / Streaming tests using ubuntu-latest with 3.9
/usr/share/miniconda/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
run-read-nwbfile-tests / Streaming tests using ubuntu-latest with 3.9
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
run-read-nwbfile-tests / Streaming tests using windows-latest with 3.11
C:\Miniconda\Lib\site-packages\conda\base\context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
run-read-nwbfile-tests / Streaming tests using windows-latest with 3.11
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
run-read-nwbfile-tests / Streaming tests using windows-latest with 3.10
C:\Miniconda\Lib\site-packages\conda\base\context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
run-read-nwbfile-tests / Streaming tests using windows-latest with 3.10
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
run-read-nwbfile-tests / Streaming tests using windows-latest with 3.12
C:\Miniconda\Lib\site-packages\conda\base\context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
run-read-nwbfile-tests / Streaming tests using windows-latest with 3.12
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
run-read-nwbfile-tests / Streaming tests using windows-latest with 3.9
C:\Miniconda\Lib\site-packages\conda\base\context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
run-read-nwbfile-tests / Streaming tests using windows-latest with 3.9
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.