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Update all annotations and check with Mypy #1099

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Update all annotations and check with Mypy

Update all annotations and check with Mypy #1099

Triggered via pull request September 27, 2024 20:31
@CodyCBakerPhDCodyCBakerPhD
synchronize #520
annotations
Status Failure
Total duration 8m 58s
Artifacts –

deploy-tests.yml

on: pull_request
assess-file-changes  /  Test changed-files
6s
assess-file-changes / Test changed-files
run-doc-link-checks  /  Testing External Links
48s
run-doc-link-checks / Testing External Links
Matrix: run-tests / build-and-test
Auto-detecting CHANGELOG.md updates
0s
Auto-detecting CHANGELOG.md updates
run-dev-gallery  /  Testing against dev PyNWB version
2m 28s
run-dev-gallery / Testing against dev PyNWB version
test-dandi-dev  /  Testing against current DANDI release and dev branch
1m 40s
test-dandi-dev / Testing against current DANDI release and dev branch
test-dandi-dev-live  /  Testing against current DANDI release and dev branch
3m 25s
test-dandi-dev-live / Testing against current DANDI release and dev branch
Matrix: run-read-nwbfile-tests / build-and-test
Matrix: run-streaming-tests / build-and-test
Matrix: test-dandi-latest / test
All tests passing
2s
All tests passing
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Annotations

1 error and 61 warnings
test-dandi-dev-live / Testing against current DANDI release and dev branch
Process completed with exit code 1.
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
assess-file-changes / Test changed-files
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
run-doc-link-checks / Testing External Links
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
run-doc-link-checks / Testing External Links
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/setup-python@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-read-nwbfile-tests / Streaming tests using ubuntu-latest with 3.11
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-read-nwbfile-tests / Streaming tests using ubuntu-latest with 3.9
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-read-nwbfile-tests / Streaming tests using ubuntu-latest with 3.10
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-read-nwbfile-tests / Streaming tests using ubuntu-latest with 3.12
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-streaming-tests / Streaming tests using ubuntu-latest with 3.11
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-streaming-tests / Streaming tests using ubuntu-latest with 3.12
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-streaming-tests / Streaming tests using ubuntu-latest with 3.9
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-streaming-tests / Streaming tests using ubuntu-latest with 3.10
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-dev-gallery / Testing against dev PyNWB version
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-tests / Testing using ubuntu-latest with 3.12
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-tests / Testing using ubuntu-latest with 3.11
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-tests / Testing using ubuntu-latest with 3.10
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-tests / Testing using ubuntu-latest with 3.9
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-streaming-tests / Streaming tests using windows-latest with 3.11
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-read-nwbfile-tests / Streaming tests using windows-latest with 3.10
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-streaming-tests / Streaming tests using windows-latest with 3.9
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-streaming-tests / Streaming tests using windows-latest with 3.10
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-read-nwbfile-tests / Streaming tests using windows-latest with 3.9
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-read-nwbfile-tests / Streaming tests using windows-latest with 3.11
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-streaming-tests / Streaming tests using windows-latest with 3.12
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-read-nwbfile-tests / Streaming tests using windows-latest with 3.12
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-tests / Testing using windows-latest with 3.12
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-tests / Testing using windows-latest with 3.12
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.12
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.12
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.12
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.12
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.9
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-tests / Testing using windows-latest with 3.9
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.9
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.9
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.9
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.9
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.10
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-tests / Testing using windows-latest with 3.10
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.10
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.10
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.10
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.10
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using macos-13 with 3.11
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-tests / Testing using macos-13 with 3.12
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-tests / Testing using windows-latest with 3.11
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-tests / Testing using windows-latest with 3.11
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.11
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.11
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.11
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using windows-latest with 3.11
WARNING conda.activate:native_path_to_unix(1034): cygpath is not available, fallback to manual path conversion
run-tests / Testing using macos-13 with 3.10
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
run-tests / Testing using macos-13 with 3.9
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/