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add user days 2024 #271
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add user days readme and logo
stephprince 28a1981
add link to readme
stephprince ee25854
fix typos and change title
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change workshop number
stephprince 3fdd75d
change workshop name to data conversion workshop
stephprince 22d4259
Merge branch 'main' into user-days-2024
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Update HCK19_2024_Remote/agenda/AGENDA.md
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<img alt="NWB 2024 User/Developer Days Banner" src="images/logo_brain_text_white_hor.png"> | ||
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# NWB User Days 2024 | ||
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* [Dates and Location](#dates-and-location) | ||
* [Registration](#registration) | ||
* [Logistics](#logistics) | ||
* [Organizing Committee](#organizing-committee) | ||
* [Resources](#resources) | ||
* [What to bring?](#what-to-bring) | ||
* [Objective](#objective) | ||
* [Agenda](#agenda) | ||
* [Code of Conduct](#code-of-conduct) | ||
* [Disclaimer](#disclaimer) | ||
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## Dates and Location | ||
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- **Dates:** June 12-14, 2024 | ||
- **Location:** Virtual | ||
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## Registration | ||
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Register for the event [here](https://forms.gle/pTsjRMEqsgCRo3VD8). | ||
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## Logistics | ||
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We will be using the Zoom for the meeting. We will send an email in the days before the workshop with Zoom links. | ||
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## Organizing Committee | ||
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**Program chair:** [Steph Prince](https://crd.lbl.gov/divisions/scidata/computational-biosciences/members/staff/stephanie-prince/) and [Oliver Rübel](https://crd.lbl.gov/divisions/scidata/mla/staff/oliver-ruebel/) | ||
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## What to bring? | ||
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* Bring any example data sets needed for your project with you to the hackathon. For any lab-specific data (i.e., | ||
data not in NWB), you should know how to read the data using Python or MATLAB and ideally have scripts ready for | ||
reading the data. | ||
* Bring your laptop with appropriate software installed. For installation instructions see: | ||
* [**PyNWB (Python)**](https://pynwb.readthedocs.io/en/stable/install_users.html). | ||
* [**MatNWB (Matlab)**](https://neurodatawithoutborders.github.io/matnwb/) | ||
* For an overview of NWB software, see also: | ||
* [**Glossary of Core NWB Tools**](https://nwb-overview.readthedocs.io/en/latest/core_tools/core_tools_home.html) | ||
* [**Glossary of Analysis and Visualization Tools**](https://nwb-overview.readthedocs.io/en/latest/tools/tools_home.html) | ||
* For an overview of NWB see the [**NWB Overview Docs**](https://nwb-overview.readthedocs.io) | ||
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## Objective | ||
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The [Neurodata Without Borders](nwb.org) project is an effort to standardize the description and storage of neurophysiology | ||
data and metadata. NWB enables data sharing and reuse and reduces the energy barrier to applying data analytics both within | ||
and across labs. NWB has seen wide adoption in the neurophysiology community, and there are now over 100 datasets on the | ||
DANDI Archive in NWB, including data from the Allen Institute and the International Brain Laboratory. | ||
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The User Days workshop will train users how to convert their data to NWB and publish it on the DANDI Archive. | ||
We will work with members of the neuroscience community that want to apply NWB to their datasets. We will train | ||
attendees, starting from the basics and proceeding to advanced data engineering techniques to maximally utilize the | ||
features of the HDF5 and Zarr backends. During this workshop, we will also introduce and train users on NWB GUIDE, a | ||
no-code user interface for data conversion. | ||
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**Note:** This event is meant to foster community and collaboration around NWB, not competition. As such, this is really | ||
more of a "workshop" or "tutorial" than a "hackathon." There will be no judges nor prizes. Participants will be expected | ||
to bring data from their own lab, bring their own tool, or other relevant project and/or collaborate with others to | ||
build integration with NWB. | ||
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## Agenda | ||
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{% include_relative agenda/AGENDA.md %} | ||
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## Code of Conduct | ||
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Please see the [Code of Conduct](https://neurodatawithoutborders.github.io/nwb_hackathons/code_of_conduct) for all NWB events. | ||
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## Disclaimer | ||
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This website and related content were prepared as an account of or to expedite work sponsored at least in part by | ||
the United States Government. While we strive to provide correct information, neither the United States Government | ||
nor any agency thereof, nor The Regents of the University of California, nor any of their employees, makes any | ||
warranty, express or implied or assumes any legal responsibility for the accuracy, completeness, or usefulness of | ||
any information, apparatus, product, or process disclosed, or represents that its use would not infringe privately | ||
owned rights. Reference herein to any specific commercial product, process, or service by its trade name, trademark, | ||
manufacturer, or otherwise, does not necessarily constitute or imply its endorsement, recommendation, or favoring by | ||
the United States Government or any agency thereof, or The Regents of the University of California. Use of the | ||
Laboratory or University’s name for endorsements is prohibited. The views and opinions of authors expressed herein | ||
do not necessarily state or reflect those of the United States Government or any agency thereof or The Regents of | ||
the University of California. Neither Berkeley Lab nor its employees are agents of the US Government. Berkeley Lab | ||
web pages link to many other websites. Such links do not constitute an endorsement of the content or company and we | ||
are not responsible for the content of such links. | ||
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**The agenda is work in | ||
progress! Further details will be announced here as they become available** | ||
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### Agenda | ||
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<!---### Agenda: Calendar---> | ||
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<!---We will update the below calendar once the agenda has been finalized.---> | ||
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<!---<iframe src="https://calendar.google.com/calendar/embed?mode=AGENDA&height=600&wkst=1&bgcolor=%23FFFFFF&src=lbl.gov_6b2ckprkr6s7eojvefua4a89a4%40group.calendar.google.com&color=%23333333&ctz=America%2FNew_York" style="border-width:0" width="800" height="600" frameborder="0" scrolling="no"></iframe> | ||
[How to add this calendar to your own?](CALENDAR_INSTRUCTIONS.md)---> | ||
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I know we have a long history of calling this event the "NWB User Days" but this does not really convey what the workshop is about, especially now that it is centered around converting data to NWB. What about "NWB Data Conversion Workshop" or "NWB User Days 2024: Convert Your Own Data"? @stephprince @oruebel @bendichter
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How about including GUIDE in the subheading? E.g. "NWB User Days: A guide to NWB conversion and adoption"
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I'm in support of changing the name. I like: "NWB Data Conversion Workshop"