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<img alt="NWB 2024 User/Developer Days Banner" src="images/logo_brain_text_white_hor.png"> | ||
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# NWB User Days 2024 | ||
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* [Dates and Location](#dates-and-location) | ||
* [Registration](#registration) | ||
* [Logistics](#logistics) | ||
* [Organizing Committee](#organizing-committee) | ||
* [Resources](#resources) | ||
* [What to bring?](#what-to-bring) | ||
* [Objective](#objective) | ||
* [Agenda](#agenda) | ||
* [Code of Conduct](#code-of-conduct) | ||
* [Disclaimer](#disclaimer) | ||
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## Dates and Location | ||
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- **Dates:** June 12-14, 2024 | ||
- **Location:** Virtual | ||
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## Registration | ||
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Register for the event [here](https://forms.gle/pTsjRMEqsgCRo3VD8). | ||
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## Logistics | ||
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We will be using the Zoom for the meeting. We will send an email in the days before the workshop with Zoom links. | ||
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## Organizing Committee | ||
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**Program chair:** [Steph Prince](https://crd.lbl.gov/divisions/scidata/computational-biosciences/members/staff/stephanie-prince/) and [Oliver Rübel](https://crd.lbl.gov/divisions/scidata/mla/staff/oliver-ruebel/) | ||
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## What to bring? | ||
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* Bring any example data sets needed for your project with you to the hackathon. For any lab-specific data (i.e., | ||
data not in NWB), you should know how to read the data using Python or MATLAB and ideally have scripts ready for | ||
reading the data. | ||
* Bring your laptop with appropriate software installed. For installation instructions see: | ||
* [**PyNWB (Python)**](https://pynwb.readthedocs.io/en/stable/install_users.html). | ||
* [**MatNWB (Matlab)**](https://neurodatawithoutborders.github.io/matnwb/) | ||
* For an overview of NWB software, see also: | ||
* [**Glossary of Core NWB Tools**](https://nwb-overview.readthedocs.io/en/latest/core_tools/core_tools_home.html) | ||
* [**Glossary of Analysis and Visualization Tools**](https://nwb-overview.readthedocs.io/en/latest/tools/tools_home.html) | ||
* For an overview of NWB see the [**NWB Overview Docs**](https://nwb-overview.readthedocs.io) | ||
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## Objective | ||
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The [Neurodata Without Borders](nwb.org) project is an effort to standardize the description and storage of neurophysiology | ||
data and metadata. NWB enables data sharing and reuse and reduces the energy barrier to applying data analytics both within | ||
and across labs. NWB has seen wide adoption in the neurophysiology community, and there are now over 100 datasets on the | ||
DANDI Archive in NWB, including data from the Allen Institute and the International Brain Laboratory. | ||
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The User Days workshop will train users how to convert their data to NWB and publish it on the DANDI Archive. | ||
We will work with members of the neuroscience community that want to apply NWB to their datasets. We will train | ||
attendees, starting from the basics and proceeding to advanced data engineering techniques to maximally utilize the | ||
features of the HDF5 and Zarr backends. During this workshop, we will also introduce and train users on NWB GUIDE, a | ||
no-code user interface for data conversion. | ||
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**Note:** This event is meant to foster community and collaboration around NWB, not competition. As such, this is really | ||
more of a "workshop" or "tutorial" than a "hackathon." There will be no judges nor prizes. Participants will be expected | ||
to bring data from their own lab, bring their own tool, or other relevant project and/or collaborate with others to | ||
build integration with NWB. | ||
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## Agenda | ||
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{% include_relative agenda/AGENDA.md %} | ||
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## Code of Conduct | ||
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Please see the [Code of Conduct](https://neurodatawithoutborders.github.io/nwb_hackathons/code_of_conduct) for all NWB events. | ||
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## Disclaimer | ||
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This website and related content were prepared as an account of or to expedite work sponsored at least in part by | ||
the United States Government. While we strive to provide correct information, neither the United States Government | ||
nor any agency thereof, nor The Regents of the University of California, nor any of their employees, makes any | ||
warranty, express or implied or assumes any legal responsibility for the accuracy, completeness, or usefulness of | ||
any information, apparatus, product, or process disclosed, or represents that its use would not infringe privately | ||
owned rights. Reference herein to any specific commercial product, process, or service by its trade name, trademark, | ||
manufacturer, or otherwise, does not necessarily constitute or imply its endorsement, recommendation, or favoring by | ||
the United States Government or any agency thereof, or The Regents of the University of California. Use of the | ||
Laboratory or University’s name for endorsements is prohibited. The views and opinions of authors expressed herein | ||
do not necessarily state or reflect those of the United States Government or any agency thereof or The Regents of | ||
the University of California. Neither Berkeley Lab nor its employees are agents of the US Government. Berkeley Lab | ||
web pages link to many other websites. Such links do not constitute an endorsement of the content or company and we | ||
are not responsible for the content of such links. | ||
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**The agenda is work in | ||
progress! Further details will be announced here as they become available** | ||
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### Agenda | ||
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<!---### Agenda: Calendar---> | ||
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<!---We will update the below calendar once the agenda has been finalized.---> | ||
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<!---<iframe src="https://calendar.google.com/calendar/embed?mode=AGENDA&height=600&wkst=1&bgcolor=%23FFFFFF&src=lbl.gov_6b2ckprkr6s7eojvefua4a89a4%40group.calendar.google.com&color=%23333333&ctz=America%2FNew_York" style="border-width:0" width="800" height="600" frameborder="0" scrolling="no"></iframe> | ||
[How to add this calendar to your own?](CALENDAR_INSTRUCTIONS.md)---> | ||
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