[pre-commit.ci] auto fixes from pre-commit.com hooks

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NeurodataWithoutBorders · Apr 5, 2024 · e4966b0 · e4966b0
1 parent f1e4c6b
commit e4966b0
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Showing 4 changed files with 15 additions and 17 deletions.
diff --git a/pyflask/apis/neuroconv.py b/pyflask/apis/neuroconv.py
@@ -127,6 +127,7 @@ def post(self):
             if notBadRequestException(exception):
                 neuroconv_api.abort(500, str(exception))
 
+
 @neuroconv_api.route("/configuration")
 class GetBackendConfiguration(Resource):
     @neuroconv_api.doc(responses={200: "Success", 400: "Bad Request", 500: "Internal server error"})
@@ -138,6 +139,7 @@ def post(self):
             if notBadRequestException(exception):
                 neuroconv_api.abort(500, str(exception))
 
+
 @neuroconv_api.route("/configuration/set")
 class SetBackendConfiguration(Resource):
     @neuroconv_api.doc(responses={200: "Success", 400: "Bad Request", 500: "Internal server error"})
@@ -149,6 +151,7 @@ def post(self):
             if notBadRequestException(exception):
                 neuroconv_api.abort(500, str(exception))
 
+
 validate_parser = neuroconv_api.parser()
 validate_parser.add_argument("parent", type=dict, required=True)
 validate_parser.add_argument("function_name", type=str, required=True)

diff --git a/pyflask/app.py b/pyflask/app.py
@@ -106,6 +106,7 @@ def get_cpu_count():
 
     return dict(physical=physical, logical=logical)
 
+
 @app.route("/get-recommended-species")
 def get_species():
     from dandi.metadata.util import species_map

diff --git a/pyflask/manageNeuroconv/manage_neuroconv.py b/pyflask/manageNeuroconv/manage_neuroconv.py
@@ -667,6 +667,7 @@ def get_interface_alignment(info: dict) -> dict:
 
     return timestamps
 
+
 def get_backend_configuration(info):
     from neuroconv.tools.nwb_helpers import get_default_backend_configuration
     from pynwb import NWBHDF5IO
@@ -682,11 +683,8 @@ def set_backend_configuration(info):
     from pynwb import NWBHDF5IO
 
     with NWBHDF5IO(info["nwbfile_path"], "r") as io:
-        nwbfile= io.read()
-        configure_backend(
-            nwbfile=nwbfile, backend_configuration=info["configuration"]
-        )
-
+        nwbfile = io.read()
+        configure_backend(nwbfile=nwbfile, backend_configuration=info["configuration"])
 
 
 def convert_to_nwb(info: dict) -> str:
@@ -783,7 +781,6 @@ def update_conversion_progress(**kwargs):
         ]
         del ecephys_metadata["ElectrodeColumns"]
 
-
     # from neuroconv.utils import NWBMetaDataEncoder
     # from neuroconv.datainterfaces.ecephys.basesortingextractorinterface import BaseSortingExtractorInterface
 

diff --git a/src/renderer/src/stories/pages/guided-mode/data/GuidedBackendConfiguration.js b/src/renderer/src/stories/pages/guided-mode/data/GuidedBackendConfiguration.js
@@ -25,7 +25,6 @@ export class GuidedBackendConfigurationPage extends ManagedPage {
 
     form;
 
-
     header = {
         subtitle: "Configure your backend",
     };
@@ -35,14 +34,14 @@ export class GuidedBackendConfigurationPage extends ManagedPage {
             skip: {
                 condition: (v) => v === false,
                 skip: true,
-            }
-        }
-    }
+            },
+        },
+    };
 
     footer = {
         onNext: async () => {
             await this.save(); // Save in case the conversion fails
-            await this.form.validate()
+            await this.form.validate();
             // for (let { form } of this.forms) await form.validate(); // Will throw an error in the callback
             return this.to(1);
         },
@@ -66,19 +65,18 @@ export class GuidedBackendConfigurationPage extends ManagedPage {
     }
 
     render() {
-
         this.#updateRendered(true);
 
         const { stubs } = this.info.globalState.preview;
         const stubArray = getStubArray(stubs);
 
         const nwbfile_path = stubArray[0].file;
-        const promise = run('configuration', {
+        const promise = run("configuration", {
             nwbfile_path,
-            backend: "hdf5"
+            backend: "hdf5",
         })
             .then((backendOptions) => {
-                console.log(backendOptions)
+                console.log(backendOptions);
                 return (this.form = new JSONSchemaForm({
                     schema: {},
                     results: {},
@@ -96,8 +94,7 @@ export class GuidedBackendConfigurationPage extends ManagedPage {
             this.#toggleRendered();
         });
 
-        return untilResult
-
+        return untilResult;
     }
 }