Merge branch 'fix_config_loading' into alphaomega

NeurodataWithoutBorders · Oct 16, 2023 · e24f29f · e24f29f
2 parents 05f2be3 + 164d35b
commit e24f29f
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/pyflask/manageNeuroconv/manage_neuroconv.py b/pyflask/manageNeuroconv/manage_neuroconv.py
@@ -525,7 +525,7 @@ def generate_dataset(test_data_directory_path: str):
 
 
 def inspect_nwb_file(payload):
-    from nwbinspector import inspect_nwbfile
+    from nwbinspector import inspect_nwbfile, load_config
     from nwbinspector.nwbinspector import InspectorOutputJSONEncoder
 
     messages = list(
@@ -534,7 +534,7 @@ def inspect_nwb_file(payload):
                 "check_description",
                 "check_data_orientation",
             ],  # TODO: remove when metadata control is exposed
-            config="dandi",
+            config=load_config(filepath_or_keyword="dandi"),
             **payload,
         )
     )
@@ -543,7 +543,7 @@ def inspect_nwb_file(payload):
 
 
 def inspect_nwb_folder(payload):
-    from nwbinspector import inspect_all
+    from nwbinspector import inspect_all, load_config
     from nwbinspector.nwbinspector import InspectorOutputJSONEncoder
 
     messages = list(
@@ -553,7 +553,7 @@ def inspect_nwb_folder(payload):
                 "check_description",
                 "check_data_orientation",
             ],  # TODO: remove when metadata control is exposed
-            config="dandi",
+            config=load_config(filepath_or_keyword="dandi"),
             **payload,
         )
     )