Merge pull request #412 from NeurodataWithoutBorders/axona-recording-…

…and-lfp Add Axona Recording Interface
NeurodataWithoutBorders · Oct 16, 2023 · 6f2a308 · 6f2a308
2 parents 0bde0f8 + 11f1bbe
commit 6f2a308
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Showing 4 changed files with 51 additions and 2 deletions.
diff --git a/guideGlobalMetadata.json b/guideGlobalMetadata.json
@@ -25,6 +25,7 @@
         "MCSRawRecordingInterface",
         "MEArecRecordingInterface",
         "PlexonRecordingInterface",
-        "PlexonSortingInterface"
+        "PlexonSortingInterface",
+        "AxonaRecordingInterface"
     ]
 }
diff --git a/schemas/json/generated/AxonaRecordingInterface.json b/schemas/json/generated/AxonaRecordingInterface.json
@@ -0,0 +1,33 @@
+{
+    "required": [],
+    "properties": {
+        "AxonaRecordingInterface": {
+            "required": [
+                "file_path"
+            ],
+            "properties": {
+                "file_path": {
+                    "format": "file",
+                    "type": "string"
+                },
+                "verbose": {
+                    "type": "boolean",
+                    "default": true
+                },
+                "es_key": {
+                    "type": "string",
+                    "default": "ElectricalSeries"
+                }
+            },
+            "type": "object",
+            "additionalProperties": false
+        }
+    },
+    "type": "object",
+    "additionalProperties": false,
+    "$schema": "http://json-schema.org/draft-07/schema#",
+    "$id": "source.schema.json",
+    "title": "Source data schema",
+    "description": "Schema for the source data, files and directories",
+    "version": "0.1.0"
+}
diff --git a/src/renderer/src/stories/pages/guided-mode/SourceData.stories.js b/src/renderer/src/stories/pages/guided-mode/SourceData.stories.js
@@ -25,6 +25,7 @@ import MCSRawRecordingInterfaceSchema from "../../../../../../schemas/json/gener
 import MEArecRecordingInterfaceSchema from "../../../../../../schemas/json/generated/MEArecRecordingInterface.json";
 import PlexonRecordingInterfaceSchema from "../../../../../../schemas/json/generated/PlexonRecordingInterface.json";
 import PlexonSortingInterfaceSchema from "../../../../../../schemas/json/generated/PlexonSortingInterface.json";
+import AxonaRecordingInterfaceSchema from "../../../../../../schemas/json/generated/AxonaRecordingInterface.json";
 
 export default {
     title: "Pages/Guided Mode/Source Data",
@@ -88,6 +89,8 @@ globalStateCopy.schema.source_data.properties.PlexonRecordingInterface =
     PlexonRecordingInterfaceSchema.properties.PlexonRecordingInterface;
 globalStateCopy.schema.source_data.properties.PlexonSortingInterface =
     PlexonSortingInterfaceSchema.properties.PlexonSortingInterface;
+globalStateCopy.schema.source_data.properties.AxonaRecordingInterface =
+    AxonaRecordingInterfaceSchema.properties.AxonaRecordingInterface;
 
 const results = globalStateCopy.results;
 for (let sub in results) {
@@ -256,3 +259,9 @@ const PlexonSortingInterfaceGlobalCopy = JSON.parse(JSON.stringify(globalState))
 PlexonSortingInterfaceGlobalCopy.interfaces.interface = PlexonSortingInterface;
 PlexonSortingInterfaceGlobalCopy.schema.source_data = PlexonSortingInterfaceSchema;
 PlexonSortingInterface.args = { activePage, globalState: PlexonSortingInterfaceGlobalCopy };
+
+export const AxonaRecordingInterface = PageTemplate.bind({});
+const AxonaRecordingInterfaceGlobalCopy = JSON.parse(JSON.stringify(globalState));
+AxonaRecordingInterfaceGlobalCopy.interfaces.interface = AxonaRecordingInterface;
+AxonaRecordingInterfaceGlobalCopy.schema.source_data = AxonaRecordingInterfaceSchema;
+AxonaRecordingInterface.args = { activePage, globalState: AxonaRecordingInterfaceGlobalCopy };
diff --git a/src/renderer/src/stories/pages/guided-mode/data/GuidedSourceData.js b/src/renderer/src/stories/pages/guided-mode/data/GuidedSourceData.js
@@ -109,10 +109,16 @@ export class GuidedSourceDataPage extends ManagedPage {
         const schema = this.info.globalState.schema.source_data;
         delete schema.description;
 
+        console.log("Schema", schema);
+
+        const schemaResolved = getSourceDataSchema(schema);
+
+        console.log("Schema", schemaResolved);
+
         const form = new JSONSchemaForm({
             identifier: instanceId,
             mode: "accordion",
-            schema: getSourceDataSchema(schema),
+            schema: schemaResolved,
             results: info.source_data,
             ignore: [
                 "verbose",