Merge pull request #18 from lbl-cbg/confi_build_note #29

	name: Run tests

	on:
	push:
	branches:
	- main

	pull_request:
	branches:
	- main
	workflow_dispatch:

	jobs:
	tests:
	defaults:
	run:
	shell: bash
	concurrency:
	group: ${{ github.workflow }}-${{ github.ref }}-${{ matrix.os }}
	cancel-in-progress: true
	strategy:
	fail-fast: false
	matrix:
	os: [macos-latest, ubuntu-latest]

	runs-on: ${{ matrix.os }}

	steps:
	- name: Checkout repository
	uses: actions/checkout@v4

	- name: Install dependencies - ubuntu
	if: matrix.os == 'ubuntu-latest'
	run: \|
	sudo apt-get update
	sudo apt-get install -y libhdf5-dev libboost-all-dev
	git clone https://github.com/catchorg/Catch2.git
	cd Catch2
	git checkout "v3.5.3"
	cmake -Bbuild -H. -DBUILD_TESTING=OFF
	sudo cmake --build build/ --target install

	- name: Install dependencies - macos
	if: matrix.os == 'macos-latest'
	run: brew install hdf5 boost catch2

	- name: Configure
	shell: pwsh
	run: cmake "--preset=ci-$("${{ matrix.os }}".split("-")[0])"

	- name: Build
	run: cmake --build build --config Release -j 2

	- name: Install
	run: cmake --install build --config Release --prefix prefix

	- name: Test
	working-directory: build
	run: ctest --output-on-failure --no-tests=error -C Release -j 2

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