moved documentation to github.io

README.md

@@ -1,44 +1,5 @@
 This project allows to use singularity containers transparently on HPCs, so that an application inside the container can be used without adjusting any scripts or pipelines (e.g. nipype). 
 
-## Important: add bind points to .bashrc before executing this script
-This script expects that you have adjusted the Singularity Bindpoints in your .bashrc, e.g.:
-```
-export SINGULARITY_BINDPATH="/gpfs1/,/QRISdata,/data"
-```
+_Information on the **Neurodesk** project is available at [neurodesk.github.io](https://neurodesk.github.io)_
 
-## This gives you a list of all tested images available in neurodesk:
-https://github.com/NeuroDesk/neurodesk/blob/master/cvmfs/log.txt
-```
-curl -s https://raw.githubusercontent.com/NeuroDesk/neurodesk/master/cvmfs/log.txt
-```
-
-## Clone repo into a folder with the intented image name
-```
-git clone https://github.com/NeuroDesk/transparent-singularity convert3d_1.0.0_20210104
-```
-
-## Install
-This will create scripts for every binary in the container located in the $DEPLOY_PATH inside the container. It will also create activate and deactivate scripts and module files for lmod (https://lmod.readthedocs.io/en/latest/)
-```
-cd convert3d_1.0.0_20210104
-./run_transparent_singularity.sh convert3d_1.0.0_20210104
-```
-
-# Use in module system LMOD
-Add the module folder path to $MODULEPATH
-
-# Manual activation and deactivation (in case module system is not available). This will add the paths to the .bashrc
-## Activate
-```
-source activate_convert3d_1.0.0_20210104.sh
-```
-
-## Deactivate
-```
-source deactivate_convert3d_1.0.0_20210104.sif.sh
-```
-
-## Uninstall container and cleanup
-```
-./ts_uninstall.sh
-```
+_Information on **Transparent Singularity** is available at [neurodesk.github.io/developers/transparent_singularity](https://neurodesk.github.io/developers/transparent_singularity)_