Fix a bug left by 17d49cd

Nesvilab/FragPipe#1673 (comment)
Nesvilab · Jul 25, 2024 · 83247ba · 83247ba
1 parent c4f30d9
commit 83247ba
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/easypqp/convert.py b/easypqp/convert.py
@@ -1,5 +1,6 @@
 import itertools
 import pathlib
+import pdb
 import time
 from .util import timestamped_echo
 import numpy as np
@@ -600,7 +601,7 @@ def parse_unimod(self):
  root = tree.getroot()
 
  ptms = {}
- sites = ['A','R','N','D','C','E','Q','G','H','O','I','L','K','M','F','P','U','S','T','W','Y','V','N-term','C-term']
+ sites = ['A','R','N','D','C','E','Q','G','H','O','I','L','K','M','F','P','U','S','T','W','Y','V','N-term','C-term', 'B', 'J', 'X', 'Z']
  positions = ['Anywhere','Any N-term','Any C-term','Protein N-term','Protein C-term']
 
  for site in sites: