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Merge pull request #382 from kedhammar/master
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Bugfix Bravo qPCR
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kedhammar authored Nov 14, 2024
2 parents cf0e9ec + a8ffb2c commit a6d38c3
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4 changes: 4 additions & 0 deletions VERSIONLOG.md
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@@ -1,5 +1,9 @@
# Scilifelab_epps Version Log

## 20241114.1

Bugfix Bravo CSV for qPCR. Needed better logic for isolating physical output artifacts.

## 20241108.1

Add col for qPCR dilution vol
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3 changes: 2 additions & 1 deletion scripts/bravo_csv.py
Original file line number Diff line number Diff line change
Expand Up @@ -239,7 +239,8 @@ def compute_transfer_volume(currentStep, lims, log):
def aliquot_fixed_volume(currentStep, lims, volume, log):
data = []
for inp, out in currentStep.input_output_maps:
if out["output-type"] == "ResultFile":
# Only act on output artifacts with a defined location
if out["uri"].location != (None, None):
obj = {}
obj["src_fc"] = (
inp["uri"].location[0].name.replace(",", "_").replace(" ", "_")
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