Update configuration readme #13
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # Test ngen-sft integration | |
| name: Ngen Integration Tests | |
| # Controls when the action will run. | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| workflow_dispatch: | |
| env: | |
| # Obtained from https://docs.github.com/en/actions/using-github-hosted-runners/about-github-hosted-runners#supported-runners-and-hardware-resources | |
| # TODO: add something later that can check the runners for hyperthreading | |
| LINUX_NUM_PROC_CORES: 2 | |
| MACOS_NUM_PROC_CORES: 3 | |
| ASAN_OPTIONS: detect_leaks=false | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # Run general unit tests in linux environment | |
| test_sft: | |
| # The type of runner that the job will run on | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| fail-fast: false | |
| runs-on: ${{ matrix.os }} | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| # Checkout and build the SoilFreezeThaw | |
| - name: Checkout the commit | |
| uses: actions/checkout@v4 | |
| - name: Build the SFT Library | |
| run: | | |
| cmake -B cmake_build -S . -DNGEN=ON | |
| make -C cmake_build | |
| - name: Save SoilFreezeThaw to a Temp Directory | |
| run: | | |
| # Move files to a temporary directory | |
| mkdir ${{runner.temp}}/sft | |
| mv ./* ${{runner.temp}}/sft | |
| # Checkout and build SoilMoistureProfiles | |
| - name: checkout actions in another repo | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: noaa-owp/soilmoistureprofiles | |
| - name: Build the SMP Library | |
| run: | | |
| cmake -B cmake_build -S . -DNGEN=ON | |
| make -C cmake_build | |
| - name: Save SoilMoistureProfiles to a Temp Directory | |
| run: | | |
| # Move files to a temporary directory | |
| mkdir ${{runner.temp}}/smp | |
| mv ./* ${{runner.temp}}/smp | |
| # Checkout and build CFE | |
| - name: Checkout the commit | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: noaa-owp/cfe | |
| - name: Build CFE Library | |
| run: | | |
| cmake -B cmake_build -S . -DNGEN=ON | |
| make -C cmake_build | |
| - name: Save CFE to a Temp Directory | |
| run: | | |
| # Move files to a temporary directory | |
| mkdir ${{runner.temp}}/cfe | |
| mv ./* ${{runner.temp}}/cfe | |
| # Checkout ngen | |
| - name: checkout actions in another repo | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: noaa-owp/ngen | |
| - name: Build PET | |
| id: submod_build_5 | |
| uses: ./.github/actions/ngen-submod-build | |
| with: | |
| mod-dir: "extern/evapotranspiration/evapotranspiration" | |
| targets: "petbmi" | |
| - name: Build SLoTH | |
| id: submod_build_6 | |
| uses: ./.github/actions/ngen-submod-build | |
| with: | |
| mod-dir: "extern/sloth/" | |
| targets: "slothmodel" | |
| # Build Ngen and save some files | |
| - name: Build Ngen | |
| id: ngen_id1 | |
| uses: ./.github/actions/ngen-build | |
| with: | |
| targets: "ngen" | |
| build-cores: ${{ env.LINUX_NUM_PROC_CORES }} | |
| bmi_c: 'ON' | |
| timeout-minutes: 15 | |
| - name: Move SFT Files Including cmake_build to Appropriate Directory | |
| run: | | |
| rm -rf extern/SoilFreezeThaw/SoilFreezeThaw/* | |
| mv ${{runner.temp}}/sft/* extern/SoilFreezeThaw/SoilFreezeThaw | |
| - name: Move SMP Files Including cmake_build to Appropriate Directory | |
| run: | | |
| rm -rf extern/SoilMoistureProfiles/SoilMoistureProfiles/* | |
| mv ${{runner.temp}}/smp/* extern/SoilMoistureProfiles/SoilMoistureProfiles | |
| - name: Move CFE Files Including cmake_build to Appropriate Directory | |
| run: | | |
| rm -rf extern/cfe/cfe/* | |
| mv ${{runner.temp}}/cfe/* extern/cfe/cfe | |
| - name: Run Ngen Test | |
| run: | | |
| # Run ngen with CFE | |
| mv ${{ steps.ngen_id1.outputs.build-dir }} ./ngen-build/ | |
| inputfile='extern/SoilFreezeThaw/SoilFreezeThaw/realizations/realization_coupled.json' | |
| ./ngen-build/ngen ./data/catchment_data.geojson "cat-27" ./data/nexus_data.geojson "nex-26" $inputfile |