Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

GitHub Issue NOAA-EMC/GSI#383 Update hpc-stack in Cheyenne modulefiles for GNU and Intel compilers. #384

Merged
merged 1 commit into from
May 19, 2022
Merged

GitHub Issue NOAA-EMC/GSI#383 Update hpc-stack in Cheyenne modulefiles for GNU and Intel compilers. #384

merged 1 commit into from
May 19, 2022

Conversation

christopherwharrop-noaa
Copy link
Contributor

@christopherwharrop-noaa christopherwharrop-noaa commented May 19, 2022 •
edited
Loading

This PR closes #383 by updating modulefiles for Cheyenne Intel and GNU builds. The version of hpc-stack was updated to a newer one maintained by EPIC. Additionally, the version of the compiler and MPT MPI was updated for Intel.

A small workaround was necessary for the GNU module file to avoid a find_dependency(w3nco) issue with the GNU version of hpc-stack.

The builds were tested successfully on Cheyenne:

Intel: ush/build.sh
GNU: bash -c "COMPILER=gnu ush/build.sh"

Regression tests were not run because they are not supported on Cheyenne.

@christopherwharrop-noaa
GitHub Issue NOAA-EMC#383
7a4fa9b 
Update hpc-stack in Cheyenne modulefiles for GNU and Intel compilers.

A small workaround was necessary for the GNU modulefile to avoid
a dependency issue with the GNU version of hpc-stack.
@MichaelLueken
Copy link
Contributor

Since there are no source code changes and are modifications to Cheyenne's modulefiles only, I will give final approval to this update and merge it to the authoritative repository.

@MichaelLueken MichaelLueken merged commit bcc0358 into NOAA-EMC:develop May 19, 2022
MichaelLueken added a commit that referenced this pull request May 27, 2022
@MichaelLueken
Merge pull request #384 from christopherwharrop-noaa/feature/update-c…
0021cc0 
…heyenne-hpc-stack

GitHub Issue #383 Update hpc-stack in Cheyenne modulefiles for GNU and Intel compilers.
EdwardSafford-NOAA pushed a commit to EdwardSafford-NOAA/GSI that referenced this pull request May 27, 2022
@MichaelLueken
Merge pull request NOAA-EMC#384 from christopherwharrop-noaa/feature/…
27f9f88 
…update-cheyenne-hpc-stack

GitHub Issue NOAA-EMC#383 Update hpc-stack in Cheyenne modulefiles for GNU and Intel compilers.
AndrewEichmann-NOAA pushed a commit to AndrewEichmann-NOAA/GSI that referenced this pull request Jun 6, 2022
@MichaelLueken
Merge pull request NOAA-EMC#384 from christopherwharrop-noaa/feature/…
d249f81 
…update-cheyenne-hpc-stack

GitHub Issue NOAA-EMC#383 Update hpc-stack in Cheyenne modulefiles for GNU and Intel compilers.
RussTreadon-NOAA added a commit to RussTreadon-NOAA/GSI that referenced this pull request Jun 21, 2022
@RussTreadon-NOAA
GitHub Issue NOAA-EMC#266. remove global_cycle from DA jobs and scripts
d19b2b0 
commit 112ca82
Merge: 257f6eb dd1bac5
Author: RussTreadon-NOAA <[email protected]>
Date:   Tue Jun 21 09:56:10 2022 -0400

    Merge branch 'NOAA-EMC:develop' into feature/rm_sfcanl

commit 257f6eb
Merge: 9c48261 ad84f17
Author: RussTreadon-NOAA <[email protected]>
Date:   Mon Jun 13 14:52:28 2022 +0000

    Merge branch 'develop' into feature/rm_sfcanl

commit 9c48261
Merge: dc62da7 eb220ca
Author: RussTreadon-NOAA <[email protected]>
Date:   Thu May 26 05:43:20 2022 -0400

    Merge branch 'NOAA-EMC:develop' into feature/rm_sfcanl

commit eb220ca
Author: michael.lueken <[email protected]>
Date:   Wed May 25 16:04:25 2022 +0000

    GitHub Issue NOAA-EMC#382.  Add GSI fix file changes for v16.3

commit 8c22b33
Merge: a90b632 cf4b323
Author: MichaelLueken-NOAA <[email protected]>
Date:   Wed May 25 15:56:49 2022 +0000

    Merge pull request NOAA-EMC#374 from ADCollard/IRBugFix

    GitHub Issue NOAA-EMC#371. Minor bug fixes to IR processing

commit dc62da7
Merge: b7afecf a90b632
Author: RussTreadon-NOAA <[email protected]>
Date:   Fri May 20 12:10:17 2022 -0400

    Merge branch 'NOAA-EMC:develop' into feature/rm_sfcanl

commit a90b632
Merge: 524527b 889cce5
Author: MichaelLueken-NOAA <[email protected]>
Date:   Fri May 20 16:08:11 2022 +0000

    Merge pull request NOAA-EMC#386 from HaixiaLiu-NOAA/master

    GitHub Issue NOAA-EMC#385. Add seviri_m09 to Radiance_Monitor util

commit 889cce5
Author: Haixia.Liu <[email protected]>
Date:   Fri May 20 04:27:21 2022 +0000

    GitHub Issue NOAA-EMC#385. Add seviri_m09 to Radiance_Monitor util

commit b7afecf
Merge: 58b52c6 524527b
Author: RussTreadon-NOAA <[email protected]>
Date:   Thu May 19 12:46:19 2022 -0400

    Merge branch 'NOAA-EMC:develop' into feature/rm_sfcanl

commit 524527b
Merge: 9946c69 002dc87
Author: MichaelLueken-NOAA <[email protected]>
Date:   Thu May 19 16:08:48 2022 +0000

    Merge pull request NOAA-EMC#379 from AndrewEichmann-NOAA/EXP-efso_fv3_issue_378

    Github issue NOAA-EMC#378: refactoring of EFSOI scripts and compiled code (EFSOI and EFSOI forecast scripts)

commit 9946c69
Merge: bcc0358 ccfda16
Author: MichaelLueken-NOAA <[email protected]>
Date:   Thu May 19 16:05:20 2022 +0000

    Merge pull request NOAA-EMC#381 from emilyhcliu/feature/gmi

    GitHub Issue NOAA-EMC#341. Add GMI for radmon

commit bcc0358
Merge: 7146a0b 7a4fa9b
Author: MichaelLueken-NOAA <[email protected]>
Date:   Thu May 19 16:02:55 2022 +0000

    Merge pull request NOAA-EMC#384 from christopherwharrop-noaa/feature/update-cheyenne-hpc-stack

    GitHub Issue NOAA-EMC#383 Update hpc-stack in Cheyenne modulefiles for GNU and Intel compilers.

commit 7a4fa9b
Author: Christopher Harrop <[email protected]>
Date:   Thu May 19 09:23:33 2022 -0600

    GitHub Issue NOAA-EMC#383

    Update hpc-stack in Cheyenne modulefiles for GNU and Intel compilers.

    A small workaround was necessary for the GNU modulefile to avoid
    a dependency issue with the GNU version of hpc-stack.

commit ccfda16
Author: Emily Liu <[email protected]>
Date:   Thu May 19 02:20:09 2022 +0000

    Add GMI for radmon

commit 58b52c6
Merge: c4c860b 7146a0b
Author: RussTreadon-NOAA <[email protected]>
Date:   Wed May 18 14:52:48 2022 -0400

    Merge branch 'NOAA-EMC:develop' into feature/rm_sfcanl

commit 7146a0b
Author: Rahul Mahajan <[email protected]>
Date:   Wed May 18 11:57:08 2022 -0400

    GitHub Issue NOAA-EMC#112.  A refactor of CMake build framework. (NOAA-EMC#327)

commit cf4b323
Author: Andrew Collard <[email protected]>
Date:   Fri Apr 29 21:34:22 2022 +0000

    GitHub Issue NOAA-EMC#371: Bug fixes to IR processing

commit 002dc87
Author: AndrewEichmann-NOAA <[email protected]>
Date:   Thu May 12 15:02:40 2022 -0500

    Removed extraneous lines from EFSOI script, and extraneous
    exgdas_efsoi_fcst.sh script

commit c4c860b
Merge: c9ac824 34294c1
Author: RussTreadon-NOAA <[email protected]>
Date:   Mon May 9 16:46:28 2022 +0000

    Merge branch 'develop' into feature/rm_sfcanl

commit 34294c1
Merge: ad2a3c0 20cf887
Author: MichaelLueken-NOAA <[email protected]>
Date:   Mon May 9 16:26:12 2022 +0000

    Merge pull request NOAA-EMC#376 from EdwardSafford-NOAA/develop

    GitHub Issue NOAA-EMC#373.  Compress RadMon data files.

commit ad2a3c0
Merge: e7f8c88 845b360
Author: MichaelLueken-NOAA <[email protected]>
Date:   Mon May 9 16:24:29 2022 +0000

    Merge pull request NOAA-EMC#369 from MichaelLueken-NOAA/feature/wcoss2_port

    GitHub Issue NOAA-EMC#368.  WCOSS2 port.

commit 20cf887
Author: Edward.Safford <[email protected]>
Date:   Thu May 5 12:04:30 2022 +0000

    Github issue NOAA-EMC#373.  Compress RadMon data files.  Completes NOAA-EMC#373.

commit 845b360
Author: Michael Lueken <[email protected]>
Date:   Fri Apr 29 11:00:52 2022 +0000

    GitHub Issue NOAA-EMC#368.  WCOSS2 port.

commit c9ac824
Merge: e577941 e7f8c88
Author: RussTreadon-NOAA <[email protected]>
Date:   Tue May 3 10:42:43 2022 -0400

    Merge branch 'NOAA-EMC:develop' into feature/rm_sfcanl

commit e7f8c88
Merge: 586c2df 0a5daea
Author: MichaelLueken-NOAA <[email protected]>
Date:   Tue May 3 10:08:34 2022 -0400

    Merge pull request NOAA-EMC#372 from RussTreadon-NOAA/feature/interp

    GitHub Issue NOAA-EMC#370: use nf90_inq_varid to set integer addresses for lon and lat variables

commit 0a5daea
Author: RussTreadon-NOAA <[email protected]>
Date:   Fri Apr 29 21:36:35 2022 +0000

    GitHub Issue NOAA-EMC/GSI NOAA-EMC#370: use nf90_inq_varid to set integer addresses for lon and lat variables

commit e577941
Merge: be550bf 586c2df
Author: RussTreadon-NOAA <[email protected]>
Date:   Tue May 3 09:52:08 2022 -0400

    Merge branch 'NOAA-EMC:develop' into feature/rm_sfcanl

commit 586c2df
Merge: 87fe77d f16e852
Author: MichaelLueken-NOAA <[email protected]>
Date:   Tue May 3 09:46:33 2022 -0400

    Merge pull request NOAA-EMC#366 from EdwardSafford-NOAA/develop

    GitHub Issue NOAA-EMC#310 and NOAA-EMC#367. Correct RadMon's mean correction time series plots and update html generation.

commit f16e852
Author: edward.safford <[email protected]>
Date:   Fri Apr 29 14:39:22 2022 +0000

    Github issue NOAA-EMC#310.  Correct mean correction time series plots.  Fixes NOAA-EMC#310.

commit be550bf
Merge: c0a5204 114ed31
Author: RussTreadon-NOAA <[email protected]>
Date:   Mon May 2 06:25:23 2022 -0400

    Merge branch 'NOAA-EMC:develop' into feature/rm_sfcanl

commit c0a5204
Merge: 8b376d1 498896b
Author: RussTreadon-NOAA <[email protected]>
Date:   Mon Apr 25 13:22:30 2022 -0400

    Merge branch 'NOAA-EMC:develop' into feature/rm_sfcanl

commit 8b376d1
Merge: 91a8077 0c6548e
Author: RussTreadon-NOAA <[email protected]>
Date:   Wed Apr 20 13:53:51 2022 -0400

    Merge branch 'NOAA-EMC:master' into feature/rm_sfcanl

commit 91a8077
Merge: dec3299 7201778
Author: RussTreadon-NOAA <[email protected]>
Date:   Wed Apr 13 10:27:36 2022 -0400

    Merge branch 'NOAA-EMC:master' into feature/rm_sfcanl

commit dec3299
Merge: 6204f98 5936a23
Author: RussTreadon-NOAA <[email protected]>
Date:   Tue Apr 5 10:49:24 2022 -0400

    Merge branch 'NOAA-EMC:master' into feature/rm_sfcanl

commit 6204f98
Merge: f7a1495 affe4ed
Author: RussTreadon-NOAA <[email protected]>
Date:   Thu Mar 31 12:38:40 2022 -0400

    Merge branch 'NOAA-EMC:master' into feature/rm_sfcanl

commit f7a1495
Merge: b592666 ef237ce
Author: RussTreadon-NOAA <[email protected]>
Date:   Thu Mar 24 08:57:46 2022 -0400

    Merge branch 'NOAA-EMC:master' into feature/rm_sfcanl

commit b592666
Merge: d0f7c20 47ee70b
Author: RussTreadon-NOAA <[email protected]>
Date:   Thu Mar 10 09:13:14 2022 -0500

    Merge branch 'NOAA-EMC:master' into feature/rm_sfcanl

commit d0f7c20
Merge: ed94193 828c0cf
Author: RussTreadon-NOAA <[email protected]>
Date:   Wed Mar 2 10:35:21 2022 -0500

    Merge branch 'NOAA-EMC:master' into feature/rm_sfcanl

commit ed94193
Merge: c63bd77 963b7e5
Author: RussTreadon-NOAA <[email protected]>
Date:   Tue Mar 1 16:04:48 2022 +0000

    Merge branch 'master' at 963b7e5 into feature/rm_sfcanl

    Conflicts:
    	scripts/exglobal_atmos_analysis.sh

commit c63bd77
Merge: 39912e1 0444258
Author: RussTreadon-NOAA <[email protected]>
Date:   Tue Feb 15 06:06:10 2022 -0500

    Merge branch 'NOAA-EMC:master' into feature/rm_sfcanl

commit 39912e1
Merge: f0161c8 9e765da
Author: RussTreadon-NOAA <[email protected]>
Date:   Tue Jan 11 06:40:58 2022 -0500

    Merge branch 'NOAA-EMC:master' into feature/rm_sfcanl

commit f0161c8
Merge: a75d6ed a62dec6
Author: RussTreadon-NOAA <[email protected]>
Date:   Tue Dec 14 11:40:31 2021 -0500

    Merge branch 'NOAA-EMC:master' into feature/rm_sfcanl

commit a75d6ed
Author: russ.treadon <[email protected]>
Date:   Tue Dec 14 14:38:57 2021 +0000

    GitHub Issue NOAA-EMC#266:  add DOGAUSFCANL capability back to JGLOBAL_ATMOS_ANALYSIS_CALC and exglobal_atmos_analysis_calc.sh

commit 9422758
Author: russ.treadon <[email protected]>
Date:   Mon Dec 13 14:39:14 2021 +0000

    GitHub Issue NOAA-EMC#266:  remove DOGCYCLE and DOGAUSFCANL scripting and variables from j-jobs and scripts

     * jobs/JGDAS_ATMOS_ANALYSIS_DIAG - remove DOGCYCLE and DOGAUSFCANL
     * jobs/JGLOBAL_ATMOS_ANALYSIS - remove DOGCYCLE and DOGAUSFCANL
     * jobs/JGLOBAL_ATMOS_ANALYSIS_CALC - remove DOGCYCLE and DOGAUSFCANL
     * scripts/exglobal_atmos_analysis.sh - remove DOGCYCLE scripting and DOGAUSFCANL variables
     * scripts/exglobal_atmos_analysis_calc.sh - remove DOGAUSFCANL scripting
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers

@MichaelLueken MichaelLueken Awaiting requested review from MichaelLueken

@dtkleist dtkleist Awaiting requested review from dtkleist

Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.

Update Cheyenne module files to use new hpc-stack location
2 participants
@christopherwharrop-noaa @MichaelLueken