Outputs

Table of output variables.

Output Variable Name	Meaning
Overall summary
diseaseDuration	Number of days from first infection until no more disease is present in the population.
outbreakDuration	Number of days from first infection until no more disease is present in the population and all control activities are finished.
Exposures
expcUDir	Cumulative number of exposures by direct contact. Every farm-to-farm contact adds 1 to this count. Repeated contacts to the same farm continue to add to the count. Note that not every exposure will transfer infection.
expcUInd	Cumulative number of exposures by indirect contact.
expcUAir	Cumulative number of exposures by airborne spread.
expcUAll	Cumulative number of exposures, total for all routes of spread.
Infections
infcUDir	Cumulative number of new infections caused by direct contact. Note that this will usually be lower than expcUDir, for 3 reasons: 1) not all exposures are adequate, 2) sometimes adequate exposures go to immune farms, and 3) sometimes multiple adequate exposures go to the same farm on the same day, but they result in only 1 new infection.
infcUInd	Cumulative number of new infections caused by indirect contact.
infcUAir	Cumulative number of new infections caused by airborne spread.
infcUAll	Cumulative number of new infections, total for all routes of spread.
Detection
detOccurred	A boolean (0 or 1) value saying whether detection occurred during the simulation.
firstDetection	Day of first detection.
detcUClin	Cumulative number of detections by observing clinical signs. Every farm where disease is detected adds 1 to this count.
detcUTest	Cumulative number of detections by lab test.
detcUAll	Cumulative number of detections, total for all means of detection. This output may be also referred to as “number of IPs” (infected premises).
Surveillance
trcUp	Cumulative number of contacts that could potentially be discovered by traces.
trcU	Cumulative number of contacts that were discovered by traces.
tstcU	Cumulative number of farms that were tested.
Destruction
destrOccurred	A boolean (0 or 1) value saying whether destruction occurred during the simulation.
firstDestruction	Day of first destruction.
deswUDaysInQueue	On each day, the number of farms currently in queue for destruction is added to this count.
deswUMax	The maximum number of farms that were in queue for destruction at once.
deswUMaxDay	The day on which the maximum number of farms in queue was reached.
deswADaysInQueue	On each day, the number of animals in all the farms currently in queue for destruction is added to this count.
deswAMax	The maximum number of animals that were in queue for destruction at once.
deswAMaxDay	The day on which the maximum number of animals in queue was reached.
deswUTimeAvg	Average wait time for destruction.
deswUTimeMax	Maximum wait time for destruction.
descU	Cumulative number of farms destroyed.
descA	Cumulative number of animals destroyed.
Zones
zoneArea	Area (in square kilometers) covered by the zone.
zonePerimeter	Perimeter (in kilometers) of the zone.
unitsInZone	Count of farms in the zone.
animalsInZone	Count of farms in the zone.
unitDaysInZone	On each day, the number of non-destroyed farms in the zone is added to this count.
animalDaysInZone	On each day, the number of living animals in the zone is added to this count.

Output Variable Name	Descriptive Name	Type	Total	By Production Type	By Cause/Reason	By Zone
tsdUSusc	TRANSITION_STATE_DAILY_UNIT_SUSCEPTIBLE	int	x	x
tsdULat	TRANSITION_STATE_DAILY_UNIT_LATENT	int	x	x
tsdUSubc	TRANSITION_STATE_DAILY_UNIT_SUBCLINICAL	int	x	x
tsdUClin	TRANSITION_STATE_DAILY_UNIT_CLINICAL	int	x	x
tsdUNImm	TRANSITION_STATE_DAILY_UNIT_NAT_IMMUNE	int	x	x
tsdUVImm	TRANSITION_STATE_DAILY_UNIT_VAC_IMMUNE	int	x	x
tsdUDest	TRANSITION_STATE_DAILY_UNIT_DESTROYED	int	x	x
tsdASusc	TRANSITION_STATE_DAILY_ANIMAL_SUSCEPTIBLE	int	x	x
tsdALat	TRANSITION_STATE_DAILY_ANIMAL_LATENT	int	x	x
tsdASubc	TRANSITION_STATE_DAILY_ANIMAL_SUSCEPTIBLE	int	x	x
tsdAClin	TRANSITION_STATE_DAILY_ANIMAL_CLINICAL	int	x	x
tsdANImm	TRANSITION_STATE_DAILY_ANIMAL_NAT_IMMUNE	int	x	x
tsdAVImm	TRANSITION_STATE_DAILY_ANIMAL_VAC_IMMUNE	int	x	x
tsdADest	TRANSITION_STATE_DAILY_ANIMAL_DESTROYED	int	x	x
diseaseDuration		int	x
expnU	EXPOSED_NEW_UNIT_X	int	x	x	x
expcU	EXPOSED_CUM_UNIT_X	int	x	x	x
expnA	EXPOSED_NEW_ANIMAL_X	int	x	x	x
expcA	EXPOSED_CUM_ANIMAL_X	int	x	x	x
adqnU	NOT_IN_ACCESS_IN_THIS_FORM	int	x
adqcU	NOT_IN_ACCESS_IN_THIS_FORM	int	x
infnU	INFECTION_NEW_UNIT_X	int	x	x	x
infcU	INFECTION_CUM_UNIT_X	int	x	x	x
infnA	INFECTION_NEW_UNIT_X	int	x	x	x
infcA	INFECTION_NEW_UNIT_X	int	x	x	x
detOccurred	NOT_IN_ACCESS_IN_THIS_FORM	int	x
firstDetection	FIRST_DETECTION	int	x	x	x
lastDetection	LAST_DETECTION	int	x	x	x
detnU	NOT_IN_ACCESS_IN_THIS_FORM	int	x	x	x
detcU	DETECT_CUM_UNIT_X	int	x	x	x
detnA	NOT_IN_ACCESS_IN_THIS_FORM	int	x	x	x
detcA	DETECT_CUM_ANIMAL_X	int	x	x	x
zoneArea		float				x
maxZoneArea		float				x
maxZoneAreaDay		int				x
zonePerimeter		float				x
maxZonePerimeter		float				x
maxZonePerimeterDay		int				x
unitsInZone		int		x		x
unitDaysInZone		int		x		x
animalDaysInZone		int		x		x
trnUp		int	x	x	x
trnU		int	x	x	x
trcUp		int	x	x	x
trcU		int	x	x	x
trnAp		int	x	x	x
trnA		int	x	x	x
trcAp		int	x	x	x
trcA		int	x	x	x
exmnU		int	x	x	x
exmcU		int	x	x	x
exmnA		int	x	x	x
exmcA		int	x	x	x
tstcU		int	x	x	x
tstcA		int	x	x	x
tstcUTruePos		int	x	x
tstcUTrueNeg		int	x	x
tstcUFalsePos		int	x	x
tstcUFalseNeg		int	x	x
costSurveillance		float	x
vaccOccurred		int	x
firstVaccination		int	x	x	x
vacwU		int	x	x
vacnU		int	x	x	x
vaccU		int	x	x	x
vacwUMax		int	x
vacwUMaxDay		int	x
vacwUDaysInQueue		int	x
vacwUTimeAvg		float	x
vacwUTimeMax		int	x
vacwA		float	x	x
vacnA		int	x	x	x
vaccA		int	x	x	x
vacwAMax		float	x
vacwAMaxDay		int	x
vacwADaysInQueue		float	x
vaccSetup		float	x
vaccVaccination		float	x
vaccSubtotal		float	x
destrOccurred		int	x
firstDestruction		int	x	x	x
deswU		int	x	x
desnU		int	x	x	x
descU		int	x	x	x
deswUMax		int	x
deswUMaxDay		int	x
deswUDaysInQueue		int	x
deswUTimeAvg		float	x
deswUTimeMax		int	x
deswA		int	x	x
desnA		int	x	x	x
descA		int	x	x	x
deswAMax		int	x
deswAMaxDay		int	x
deswADaysInQueue		int	x
destrAppraisal		float	x
destrEuthanasia		float	x
destrIndemnification		float	x
destrDisposal		float	x
destrCleaning		float	x
destrSubtotal		float	x
outbreakDuration		int	x
costsTotal		float	x