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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,7 @@ | ||
| { | ||
| "semi": true, | ||
| "trailingComma": "all", | ||
| "singleQuote": true, | ||
| "printWidth": 80, | ||
| "tabWidth": 2 | ||
| } |
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Learn more about bidirectional Unicode characters
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,123 +1,161 @@ | ||
| import React, {useEffect, useState} from 'react'; | ||
| import {useDispatch, useStore} from 'react-redux'; | ||
| import { Box } from "@mui/material"; | ||
| import {getLayoutManagerInstance} from "@metacell/geppetto-meta-client/common/layout/LayoutManager"; | ||
| import {addWidget} from '@metacell/geppetto-meta-client/common/layout/actions'; | ||
| import {connectionsWidget, connectivityGridWidget} from "./layout-manager/widgets.ts"; | ||
| import '@metacell/geppetto-meta-ui/flex-layout/style/light.scss'; | ||
| import theme from './theme/index.tsx'; | ||
| import {ThemeProvider} from '@mui/material/styles'; | ||
| import CssBaseline from '@mui/material/CssBaseline'; | ||
| import Header from './components/common/Header.tsx'; | ||
| import {BrowserRouter as Router, Routes, Route} from 'react-router-dom'; | ||
| import SummaryPage from "./components/SummaryPage.tsx"; | ||
| import Loader from './components/common/Loader.tsx'; | ||
| import {DataContextProvider} from './context/DataContextProvider.tsx'; | ||
| import {fetchJSON, fetchKnowledgeStatements, fetchMajorNerves} from "./services/fetchService.ts"; | ||
| import {getUniqueMajorNerves} from "./services/filterValuesService.ts"; | ||
| import {HierarchicalNode, KnowledgeStatement, Organ} from "./models/explorer.ts"; | ||
| import {getHierarchicalNodes, getOrgans} from "./services/hierarchyService.ts"; | ||
|
|
||
| const App = () => { | ||
| const store = useStore(); | ||
| const dispatch = useDispatch(); | ||
| const [LayoutComponent, setLayoutComponent] = useState<React.ComponentType | undefined>(undefined); | ||
| const [hierarchicalNodes, setHierarchicalNodes] = useState<Record<string, HierarchicalNode>>({}); | ||
| const [organs, setOrgans] = useState<Record<string, Organ>>({}); | ||
| const [majorNerves, setMajorNerves] = useState<Set<string>>(); | ||
| const [knowledgeStatements, setKnowledgeStatements] = useState<Record<string, KnowledgeStatement>>({}); | ||
|
|
||
| useEffect(() => { | ||
| if (LayoutComponent === undefined) { | ||
| const myManager = getLayoutManagerInstance(); | ||
| if (myManager) { | ||
| setLayoutComponent(myManager.getComponent()); | ||
| } | ||
| } | ||
| }, [store, dispatch, LayoutComponent]) | ||
|
|
||
| useEffect(() => { | ||
| dispatch(addWidget(connectivityGridWidget())); | ||
| dispatch(addWidget(connectionsWidget())); | ||
| }, [LayoutComponent, dispatch]) | ||
|
|
||
| useEffect(() => { | ||
| fetchJSON().then(data => { | ||
| setHierarchicalNodes(getHierarchicalNodes(data)); | ||
| setOrgans(getOrgans(data)) | ||
| }).catch(error => { | ||
| // TODO: We should give feedback to the user | ||
| console.error("Failed to fetch JSON data:", error); | ||
| }); | ||
|
|
||
| fetchMajorNerves().then(data => { | ||
| setMajorNerves(getUniqueMajorNerves(data)); | ||
| }).catch(error => { | ||
| // TODO: We should give feedback to the user | ||
| console.error("Failed to fetch major nerves data:", error); | ||
| setMajorNerves(undefined); | ||
| }); | ||
| }, []); | ||
|
|
||
| useEffect(() => { | ||
| if (Object.keys(hierarchicalNodes).length > 0) { | ||
| const neuronIDsSet = new Set<string>(); | ||
|
|
||
| // Loop through each node's connectionDetails and add all ids to the neuronIDsSet | ||
| Object.values(hierarchicalNodes).forEach(node => { | ||
| if (node.connectionDetails) { | ||
| Object.values(node.connectionDetails).forEach(ksIds => { | ||
| ksIds.forEach(id => neuronIDsSet.add(id)); | ||
| }); | ||
| } | ||
| }); | ||
|
|
||
| fetchKnowledgeStatements(Array.from(neuronIDsSet)) | ||
| .then(statements => { | ||
| // Convert array to a map by ID for easy access | ||
| const ksMap = statements.reduce<Record<string, KnowledgeStatement>>((acc, ks) => { | ||
| acc[ks.id] = ks; | ||
| return acc; | ||
| }, {}); | ||
| setKnowledgeStatements(ksMap) | ||
| }).catch(error => { | ||
| // TODO: We should give feedback to the user | ||
| console.error("Failed to fetch knowledge statements data:", error); | ||
| }) | ||
| } | ||
| }, [hierarchicalNodes]); | ||
|
|
||
| const isLoading = LayoutComponent === undefined || Object.keys(hierarchicalNodes).length === 0 | ||
| || majorNerves === undefined || Object.keys(organs).length == 0 || Object.keys(knowledgeStatements).length == 0 | ||
|
|
||
| return ( | ||
| <> | ||
| <ThemeProvider theme={theme}> | ||
| <CssBaseline/> | ||
| <Router> | ||
| <Box> | ||
| <Header/> | ||
| <Box className="MuiContainer"> | ||
| <Routes> | ||
| <Route path="/summary" element={<SummaryPage/>}/> | ||
| <Route path="/" element={isLoading ? <Loader /> : | ||
| <DataContextProvider | ||
| majorNerves={majorNerves} | ||
| hierarchicalNodes={hierarchicalNodes} | ||
| organs={organs} | ||
| knowledgeStatements={knowledgeStatements} | ||
| > | ||
| <LayoutComponent/> | ||
| </DataContextProvider> | ||
| } | ||
| /> | ||
| </Routes> | ||
| </Box> | ||
| </Box> | ||
| </Router> | ||
| </ThemeProvider> | ||
| </> | ||
| ); | ||
| } | ||
|
|
||
| export default App; | ||
| import React, { useEffect, useState } from 'react'; | ||
| import { useDispatch, useStore } from 'react-redux'; | ||
| import { Box } from '@mui/material'; | ||
| import { getLayoutManagerInstance } from '@metacell/geppetto-meta-client/common/layout/LayoutManager'; | ||
| import { addWidget } from '@metacell/geppetto-meta-client/common/layout/actions'; | ||
| import { | ||
| connectionsWidget, | ||
| connectivityGridWidget, | ||
| } from './layout-manager/widgets.ts'; | ||
| import '@metacell/geppetto-meta-ui/flex-layout/style/light.scss'; | ||
| import theme from './theme/index.tsx'; | ||
| import { ThemeProvider } from '@mui/material/styles'; | ||
| import CssBaseline from '@mui/material/CssBaseline'; | ||
| import Header from './components/common/Header.tsx'; | ||
| import { BrowserRouter as Router, Routes, Route } from 'react-router-dom'; | ||
| import SummaryPage from './components/SummaryPage.tsx'; | ||
| import Loader from './components/common/Loader.tsx'; | ||
| import { DataContextProvider } from './context/DataContextProvider.tsx'; | ||
| import { | ||
| fetchJSON, | ||
| fetchKnowledgeStatements, | ||
| fetchMajorNerves, | ||
| } from './services/fetchService.ts'; | ||
| import { getUniqueMajorNerves } from './services/filterValuesService.ts'; | ||
| import { | ||
| HierarchicalNode, | ||
| KnowledgeStatement, | ||
| Organ, | ||
| } from './models/explorer.ts'; | ||
| import { | ||
| getHierarchicalNodes, | ||
| getOrgans, | ||
| } from './services/hierarchyService.ts'; | ||
|
|
||
| const App = () => { | ||
| const store = useStore(); | ||
| const dispatch = useDispatch(); | ||
| const [LayoutComponent, setLayoutComponent] = useState< | ||
| React.ComponentType | undefined | ||
| >(undefined); | ||
| const [hierarchicalNodes, setHierarchicalNodes] = useState< | ||
| Record<string, HierarchicalNode> | ||
| >({}); | ||
| const [organs, setOrgans] = useState<Record<string, Organ>>({}); | ||
| const [majorNerves, setMajorNerves] = useState<Set<string>>(); | ||
| const [knowledgeStatements, setKnowledgeStatements] = useState< | ||
| Record<string, KnowledgeStatement> | ||
| >({}); | ||
|
|
||
| useEffect(() => { | ||
| if (LayoutComponent === undefined) { | ||
| const myManager = getLayoutManagerInstance(); | ||
| if (myManager) { | ||
| setLayoutComponent(myManager.getComponent()); | ||
| } | ||
| } | ||
| }, [store, dispatch, LayoutComponent]); | ||
|
|
||
| useEffect(() => { | ||
| dispatch(addWidget(connectivityGridWidget())); | ||
| dispatch(addWidget(connectionsWidget())); | ||
| }, [LayoutComponent, dispatch]); | ||
|
|
||
| useEffect(() => { | ||
| fetchJSON() | ||
| .then((data) => { | ||
| setHierarchicalNodes(getHierarchicalNodes(data)); | ||
| setOrgans(getOrgans(data)); | ||
| }) | ||
| .catch((error) => { | ||
| // TODO: We should give feedback to the user | ||
| console.error('Failed to fetch JSON data:', error); | ||
| }); | ||
|
|
||
| fetchMajorNerves() | ||
| .then((data) => { | ||
| setMajorNerves(getUniqueMajorNerves(data)); | ||
| }) | ||
| .catch((error) => { | ||
| // TODO: We should give feedback to the user | ||
| console.error('Failed to fetch major nerves data:', error); | ||
| setMajorNerves(undefined); | ||
| }); | ||
| }, []); | ||
|
|
||
| useEffect(() => { | ||
| if (Object.keys(hierarchicalNodes).length > 0) { | ||
| const neuronIDsSet = new Set<string>(); | ||
|
|
||
| // Loop through each node's connectionDetails and add all ids to the neuronIDsSet | ||
| Object.values(hierarchicalNodes).forEach((node) => { | ||
| if (node.connectionDetails) { | ||
| Object.values(node.connectionDetails).forEach((ksIds) => { | ||
| ksIds.forEach((id) => neuronIDsSet.add(id)); | ||
| }); | ||
| } | ||
| }); | ||
|
|
||
| fetchKnowledgeStatements(Array.from(neuronIDsSet)) | ||
| .then((statements) => { | ||
| // Convert array to a map by ID for easy access | ||
| const ksMap = statements.reduce<Record<string, KnowledgeStatement>>( | ||
| (acc, ks) => { | ||
| acc[ks.id] = ks; | ||
| return acc; | ||
| }, | ||
| {}, | ||
| ); | ||
| setKnowledgeStatements(ksMap); | ||
| }) | ||
| .catch((error) => { | ||
| // TODO: We should give feedback to the user | ||
| console.error('Failed to fetch knowledge statements data:', error); | ||
| }); | ||
| } | ||
| }, [hierarchicalNodes]); | ||
|
|
||
| const isLoading = | ||
| LayoutComponent === undefined || | ||
| Object.keys(hierarchicalNodes).length === 0 || | ||
| majorNerves === undefined || | ||
| Object.keys(organs).length == 0 || | ||
| Object.keys(knowledgeStatements).length == 0; | ||
|
|
||
| return ( | ||
| <> | ||
| <ThemeProvider theme={theme}> | ||
| <CssBaseline /> | ||
| <Router> | ||
| <Box> | ||
| <Header /> | ||
| <Box className="MuiContainer"> | ||
| <Routes> | ||
| <Route path="/summary" element={<SummaryPage />} /> | ||
| <Route | ||
| path="/" | ||
| element={ | ||
| isLoading ? ( | ||
| <Loader /> | ||
| ) : ( | ||
| <DataContextProvider | ||
| majorNerves={majorNerves} | ||
| hierarchicalNodes={hierarchicalNodes} | ||
| organs={organs} | ||
| knowledgeStatements={knowledgeStatements} | ||
| > | ||
| <LayoutComponent /> | ||
| </DataContextProvider> | ||
| ) | ||
| } | ||
| /> | ||
| </Routes> | ||
| </Box> | ||
| </Box> | ||
| </Router> | ||
| </ThemeProvider> | ||
| </> | ||
| ); | ||
| }; | ||
|
|
||
| export default App; |
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