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Test that the MIMIC-IV ETL runs on the MIMIC-IV demo dataset #2

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Test that the MIMIC-IV ETL runs on the MIMIC-IV demo dataset

Test that the MIMIC-IV ETL runs on the MIMIC-IV demo dataset #2

Workflow file for this run

.github/workflows/python-test.yml at 177f9f2
name: Run tests
on:
push:
branches: [ "main" ]
pull_request:
branches: [ "main" ]
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.8", "3.9", "3.10"]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v3
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install flake8 pytest
- name: Download MIMIC-IV-Demo (v2.2)
run: |
# Download the MIMIC-IV-Demo dataset (v2.2) to a tests/data/ directory
wget -r -N -c --no-host-directories --cut-dirs=1 -np -P tests/data https://physionet.org/files/mimic-iv-demo/2.2/
- name: Run tests
run: |
pytest -v