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Updated to fit new code #55

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merged 1 commit into from
Mar 7, 2024
Merged

Updated to fit new code #55

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7 changes: 5 additions & 2 deletions tests/test_extraction.py
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Original file line number Diff line number Diff line change
Expand Up @@ -32,13 +32,15 @@ def test_morph_features(self):
vol=phantom,
mask_int=roi,
mask_morph=roi,
res=[1,1,1]
res=[1,1,1],
intensity_type="arbitrary"
)
morph_vol = MEDimage.biomarkers.morph.vol(
vol=phantom,
mask_int=roi,
mask_morph=roi,
res=[1,1,1]
res=[1,1,1],
intensity_type="arbitrary"
)
assert morph_vol == morph["Fmorph_vol"]
assert round(morph_vol, 2) == 0.83
Expand All @@ -52,6 +54,7 @@ def test_stats_features(self):
)
stats = MEDimage.biomarkers.stats.extract_all(
vol=vol_int_re,
intensity_type="arbitrary"
)
kurt = MEDimage.biomarkers.stats.kurt(
vol=vol_int_re,
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