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Update hyperlinks in repository README.md #76

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110 changes: 55 additions & 55 deletions README.md
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Expand Up @@ -22,116 +22,116 @@ OMOP TABLES LOADED
==================

- [PERSON](etl/StandardizedClinicalDataTables/PERSON)
- [patients](https://mimic.physionet.org/mimictables/patients/)
- [admissions](https://mimic.physionet.org/mimictables/admissions/)
- [patients](https://mimic.mit.edu/docs/iii/tables/patients/)
- [admissions](https://mimic.mit.edu/docs/iii/tables/admissions/)
- [DEATH](etl/StandardizedClinicalDataTables/DEATH)
- [patients](https://mimic.physionet.org/mimictables/patients/)
- [admissions](https://mimic.physionet.org/mimictables/admissions/)
- [patients](https://mimic.mit.edu/docs/iii/tables/patients/)
- [admissions](https://mimic.mit.edu/docs/iii/tables/admissions/)
- [VISIT_OCCURRENCE](etl/StandardizedClinicalDataTables/VISIT_OCCURRENCE)
- [admissions](https://mimic.physionet.org/mimictables/admissions/)
- [admissions](https://mimic.mit.edu/docs/iii/tables/admissions/)
- [VISIT_DETAIL](etl/StandardizedClinicalDataTables/VISIT_DETAIL)
- [admissions](https://mimic.physionet.org/mimictables/admissions/)
- [transfers](https://mimic.physionet.org/mimictables/transfers/)
- [service](https://mimic.physionet.org/mimictables/services/)
- [admissions](https://mimic.mit.edu/docs/iii/tables/admissions/)
- [transfers](https://mimic.mit.edu/docs/iii/tables/transfers/)
- [service](https://mimic.mit.edu/docs/iii/tables/services/)
- [SPECIMEN](etl/StandardizedClinicalDataTables/SPECIMEN)
- [chartevents](https://mimic.physionet.org/mimictables/chartevents/)
- [labevents](https://mimic.physionet.org/mimictables/labevents/)
- [microbiologyevents](https://mimic.physionet.org/mimictables/microbiologyevents/)
- [chartevents](https://mimic.mit.edu/docs/iii/tables/chartevents/)
- [labevents](https://mimic.mit.edu/docs/iii/tables/labevents/)
- [microbiologyevents](https://mimic.mit.edu/docs/iii/tables/microbiologyevents/)
- [MEASUREMENT](etl/StandardizedClinicalDataTables/MEASUREMENT)
- [chartevents](https://mimic.physionet.org/mimictables/chartevents/)
- [labevents](https://mimic.physionet.org/mimictables/labevents/)
- [microbiologyevents](https://mimic.physionet.org/mimictables/microbiologyevents/)
- [outputevents](https://mimic.physionet.org/mimictables/outputevents/)
- [inputevents_mv](https://mimic.physionet.org/mimictables/inputevents_mv/)
- [chartevents](https://mimic.mit.edu/docs/iii/tables/chartevents/)
- [labevents](https://mimic.mit.edu/docs/iii/tables/labevents/)
- [microbiologyevents](https://mimic.mit.edu/docs/iii/tables/microbiologyevents/)
- [outputevents](https://mimic.mit.edu/docs/iii/tables/outputevents/)
- [inputevents_mv](https://mimic.mit.edu/docs/iii/tables/inputevents_mv/)
- [PROCEDURE_OCCURRENCE](etl/StandardizedClinicalDataTables/PROCEDURE_OCCURRENCE)
- [cptevents](https://mimic.physionet.org/mimictables/cptevents/)
- [procedureevents_mv](https://mimic.physionet.org/mimictables/procedureevents_mv/)
- [procedure_icd](https://mimic.physionet.org/mimictables/procedures_icd/)
- [cptevents](https://mimic.mit.edu/docs/iii/tables/cptevents/)
- [procedureevents_mv](https://mimic.mit.edu/docs/iii/tables/procedureevents_mv/)
- [procedure_icd](https://mimic.mit.edu/docs/iii/tables/procedures_icd/)
- [CONDITION_OCCURRENCE](etl/StandardizedClinicalDataTables/CONDITION_OCCURRENCE)
- [admissions](https://mimic.physionet.org/mimictables/admissions/)
- [diagnosis_icd](https://mimic.physionet.org/mimictables/diagnoses_icd/)
- [admissions](https://mimic.mit.edu/docs/iii/tables/admissions/)
- [diagnosis_icd](https://mimic.mit.edu/docs/iii/tables/diagnoses_icd/)
- [OBSERVATION](etl/StandardizedClinicalDataTables/OBSERVATION)
- [admissions](https://mimic.physionet.org/mimictables/admissions/)
- [chartevents](https://mimic.physionet.org/mimictables/chartevents/)
- [datetimeevents](https://mimic.physionet.org/mimictables/datetimeevents/)
- [drgcodes](https://mimic.physionet.org/mimictables/drgcodes/)
- [admissions](https://mimic.mit.edu/docs/iii/tables/admissions/)
- [chartevents](https://mimic.mit.edu/docs/iii/tables/chartevents/)
- [datetimeevents](https://mimic.mit.edu/docs/iii/tables/datetimeevents/)
- [drgcodes](https://mimic.mit.edu/docs/iii/tables/drgcodes/)
- [DRUG_EXPOSURE](etl/StandardizedClinicalDataTables/DRUG_EXPOSURE)
- [prescriptions](https://mimic.physionet.org/mimictables/prescriptions/)
- [inputevents_cv](https://mimic.physionet.org/mimictables/inputevents_cv/)
- [inputevents_mv](https://mimic.physionet.org/mimictables/inputevents_mv/)
- [prescriptions](https://mimic.mit.edu/docs/iii/tables/prescriptions/)
- [inputevents_cv](https://mimic.mit.edu/docs/iii/tables/inputevents_cv/)
- [inputevents_mv](https://mimic.mit.edu/docs/iii/tables/inputevents_mv/)
- [NOTE](etl/StandardizedClinicalDataTables/NOTE)
- [notevents](https://mimic.physionet.org/mimictables/noteevents/)
- [notevents](https://mimic.mit.edu/docs/iii/tables/noteevents/)
- [NOTE_NLP](etl/StandardizedClinicalDataTables/NOTE_NLP)
- [notevents](https://mimic.physionet.org/mimictables/noteevents/)
- [notevents](https://mimic.mit.edu/docs/iii/tables/noteevents/)
- [COHORT_DEFINITION](etl/StandardizedVocabularies/COHORT_DEFINITION)
- [COHORT](etl/StandardizedDerivedElements/COHORT)
- [COHORT_ATTRIBUTE](etl/StandardizedDerivedElements//COHORT_ATTRIBUTE)
- [callout](https://mimic.physionet.org/mimictables/callout/)
- [callout](https://mimic.mit.edu/docs/iii/tables/callout/)
- [ATTRIBUTE_DEFINITION](etl/StandardizedVocabularies/ATTRIBUTE_DEFINITION)
- [CARE_SITE](etl/StandardizedHealthSystemDataTables/CARE_SITE)
- [transfers](https://mimic.physionet.org/mimictables/transfers/)
- [service](https://mimic.physionet.org/mimictables/services/)
- [transfers](https://mimic.mit.edu/docs/iii/tables/transfers/)
- [service](https://mimic.mit.edu/docs/iii/tables/services/)
- [PROVIDER](etl/StandardizedHealthSystemDataTables/PROVIDER)
- [caregivers](https://mimic.physionet.org/mimictables/caregivers/)
- [caregivers](https://mimic.mit.edu/docs/iii/tables/caregivers/)

[![MIMIC](https://github.com/MIT-LCP/mimic-omop/blob/master/images/mimic.png)](https://mimic.physionet.org/)

MIMIC TABLES EQUIVALENCE
========================

- [patients](https://mimic.physionet.org/mimictables/patients/)
- [patients](https://mimic.mit.edu/docs/iii/tables/patients/)
- [PERSON](etl/StandardizedClinicalDataTables/PERSON)
- [DEATH](etl/StandardizedClinicalDataTables/DEATH)
- [admissions](https://mimic.physionet.org/mimictables/admissions/)
- [admissions](https://mimic.mit.edu/docs/iii/tables/admissions/)
- [PERSON](etl/StandardizedClinicalDataTables/PERSON)
- [DEATH](etl/StandardizedClinicalDataTables/DEATH)
- [VISIT_OCCURRENCE](etl/StandardizedClinicalDataTables/VISIT_OCCURRENCE)
- [VISIT_DETAIL](etl/StandardizedClinicalDataTables/VISIT_DETAIL)
- [OBSERVATION](etl/StandardizedClinicalDataTables/OBSERVATION)
- [CONDITION_OCCURRENCE](etl/StandardizedClinicalDataTables/CONDITION_OCCURRENCE)
- [transfers](https://mimic.physionet.org/mimictables/transfers/)
- [transfers](https://mimic.mit.edu/docs/iii/tables/transfers/)
- [VISIT_DETAIL](etl/StandardizedClinicalDataTables/VISIT_DETAIL)
- [icustays](https://mimic.physionet.org/mimictables/icustays/)
- [icustays](https://mimic.mit.edu/docs/iii/tables/icustays/)
- The ICUSTAYS table is fully derived from the transfers table
- [service](https://mimic.physionet.org/mimictables/services/)
- [service](https://mimic.mit.edu/docs/iii/tables/services/)
- [VISIT_DETAIL](etl/StandardizedClinicalDataTables/VISIT_DETAIL)
- [prescriptions](https://mimic.physionet.org/mimictables/prescriptions/)
- [prescriptions](https://mimic.mit.edu/docs/iii/tables/prescriptions/)
- [DRUG_EXPOSURE](etl/StandardizedClinicalDataTables/DRUG_EXPOSURE)
- [inputevents_cv](https://mimic.physionet.org/mimictables/inputevents_cv/)
- [inputevents_cv](https://mimic.mit.edu/docs/iii/tables/inputevents_cv/)
- [DRUG_EXPOSURE](etl/StandardizedClinicalDataTables/DRUG_EXPOSURE)
- [inputevents_mv](https://mimic.physionet.org/mimictables/inputevents_mv/)
- [inputevents_mv](https://mimic.mit.edu/docs/iii/tables/inputevents_mv/)
- [DRUG_EXPOSURE](etl/StandardizedClinicalDataTables/DRUG_EXPOSURE)
- [MEASUREMENT](etl/StandardizedClinicalDataTables/MEASUREMENT)
- [outputevents](https://mimic.physionet.org/mimictables/outputevents/)
- [outputevents](https://mimic.mit.edu/docs/iii/tables/outputevents/)
- [MEASUREMENT](etl/StandardizedClinicalDataTables/MEASUREMENT)
- [labevents](https://mimic.physionet.org/mimictables/labevents/)
- [labevents](https://mimic.mit.edu/docs/iii/tables/labevents/)
- [SPECIMEN](etl/StandardizedClinicalDataTables/SPECIMEN)
- [MEASUREMENT](etl/StandardizedClinicalDataTables/MEASUREMENT)
- [microbiologyevents](https://mimic.physionet.org/mimictables/microbiologyevents/)
- [microbiologyevents](https://mimic.mit.edu/docs/iii/tables/microbiologyevents/)
- [SPECIMEN](etl/StandardizedClinicalDataTables/SPECIMEN)
- [MEASUREMENT](etl/StandardizedClinicalDataTables/MEASUREMENT)
- [chartevents](https://mimic.physionet.org/mimictables/chartevents/)
- [chartevents](https://mimic.mit.edu/docs/iii/tables/chartevents/)
- [SPECIMEN](etl/StandardizedClinicalDataTables/SPECIMEN)
- [MEASUREMENT](etl/StandardizedClinicalDataTables/MEASUREMENT)
- [OBSERVATION](etl/StandardizedClinicalDataTables/OBSERVATION)
- [drgcodes](https://mimic.physionet.org/mimictables/drgcodes/)
- [drgcodes](https://mimic.mit.edu/docs/iii/tables/drgcodes/)
- [OBSERVATION](etl/StandardizedClinicalDataTables/OBSERVATION)
- [datetimeevents](https://mimic.physionet.org/mimictables/datetimeevents/)
- [datetimeevents](https://mimic.mit.edu/docs/iii/tables/datetimeevents/)
- [OBSERVATION](etl/StandardizedClinicalDataTables/OBSERVATION)
- [procedure_icd](https://mimic.physionet.org/mimictables/procedures_icd/)
- [procedure_icd](https://mimic.mit.edu/docs/iii/tables/procedures_icd/)
- [PROCEDURE_OCCURRENCE](etl/StandardizedClinicalDataTables/PROCEDURE_OCCURRENCE)
- [procedureevents_mv](https://mimic.physionet.org/mimictables/procedureevents_mv/)
- [procedureevents_mv](https://mimic.mit.edu/docs/iii/tables/procedureevents_mv/)
- [PROCEDURE_OCCURRENCE](etl/StandardizedClinicalDataTables/PROCEDURE_OCCURRENCE)
- [cptevents](https://mimic.physionet.org/mimictables/cptevents/)
- [cptevents](https://mimic.mit.edu/docs/iii/tables/cptevents/)
- [PROCEDURE_OCCURRENCE](etl/StandardizedClinicalDataTables/PROCEDURE_OCCURRENCE)
- [diagnosis_icd](https://mimic.physionet.org/mimictables/diagnoses_icd/)
- [diagnosis_icd](https://mimic.mit.edu/docs/iii/tables/diagnoses_icd/)
- [CONDITION_OCCURRENCE](etl/StandardizedClinicalDataTables/CONDITION_OCCURRENCE)
- [notevents](https://mimic.physionet.org/mimictables/noteevents/)
- [notevents](https://mimic.mit.edu/docs/iii/tables/noteevents/)
- [NOTE](etl/StandardizedClinicalDataTables/NOTE)
- [NOTE_NLP](etl/StandardizedClinicalDataTables/NOTE_NLP)
- [caregivers](https://mimic.physionet.org/mimictables/caregivers/)
- [caregivers](https://mimic.mit.edu/docs/iii/tables/caregivers/)
- [PROVIDER](etl/StandardizedHealthSystemDataTables/PROVIDER)
- [callout](https://mimic.physionet.org/mimictables/callout/)
- [callout](https://mimic.mit.edu/docs/iii/tables/callout/)
- [COHORT_ATTRIBUTES](etl/StandardizedDerivedElements/COHORT_ATTRIBUTE)