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3.0.2
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@MBoemo MBoemo released this 28 Jul 07:36
· 32 commits to master since this release
3.0.2
5d4869c
  • DNAscent detect now detects two different thymidine analogues, BrdU and EdU, in the same molecule,
  • DNAscent forkSense now uses the spatial patterning of EdU and BrdU to determine fork direction as in DNA fibre,
  • dnascent2bedgraph utility updated to plot both EdU and BrdU tracks in genome browsers,
  • DNAscent regions is now deprecated and has been fully superceded by DNAscent forkSense,
  • DNAscent psl is now deprecated as reads can be more comprehensively plotted using the dnascent2bedgraph utility,
  • Migration from Tensorflow 1.14 to 2.4.1 and, correspondingly, GPU usage now requires CUDA 11 and cuDNN 8,
  • Released with Totanes FIG, Gockel J, Chapman SE, Bartfai R, Boemo MA, Merrick CJ. Replication origin mapping in the malaria parasite Plasmodium falciparum. bioRxiv.
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